7CRC
Cryo-em structure of plant nlr rpp1 tetramer in complex with atr1
PDB DOI: 10.2210/pdb7crc/pdb
Classification: PLANT PROTEIN Organism(s): Arabidopsis Thaliana , Hyaloperonospora Arabidopsidis (Strain Emoy2)
Deposited: 2020-08-13 Deposition Author(s): Chai, J.J. , Han, Z.F. , Jirschitzka, J. , Lapin, D. , Liu, L. , Logemann, E. , Ma, S.C. , Parker, J.E. , Schulzelefert, P. , Song, W. , Sun, Y. , Wang, J. , Yu, D.L. , Zhang, X.X.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.02 Å
Cryo-em structure of plant nlr rpp1 tetramer in complex with atr1
Chai, J.J. , Han, Z.F. , Jirschitzka, J. , Lapin, D. , Liu, L. , Logemann, E. , Ma, S.C. , Parker, J.E. , Schulzelefert, P. , Song, W. , Sun, Y. , Wang, J. , Yu, D.L. , Zhang, X.X.
Primary Citation of Related Structures: 7CRC
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| NAD+ hydrolase (NADase) | A | 1221 | Arabidopsis Thaliana , Hyaloperonospora Arabidopsidis (Strain Emoy2) | MGSAMSLGCSKRKATNQDVDSESRKRRKICSTNDAENCRFIQDESSWKHPWSLCANSVVNDTKDTKSSALSLPSPPTSVSRIWKHQVFPSFHGADVRKTILSHILESFRRKGIDPFIDNNIERSKSIGHELKEAIKGSKIAIVLLSKNYASSSWCLDELAEIMKCRELLGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCKGKTKEYVERWRKALEDVATIAGYHSHKWRNEADMIEKIATDVSNMLNSFKPSRDFNGLVGMRAHMDMLEQLLRLVLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCYPRPCFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAKETRWFGPGSRIIITTEDLGVLKAHGINHVYKVGYPSNDEAFQIFCMNAFGQKQPHEGFDEIAREVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLKTSLDGKIGSIIQFSYDALCDEDKYLFLYIACLFNKESTTKVEGLLGKFLDVRQGLHILAQKSLISIEDGNIYMHTLLEQFGRETSRKQFIHHGYTKHQLLVGERDICEVLNDDTIDSRRFIGINLDLYKNVEELNISEKALERIHDFQFVRINGKNHALHERLQGLIYQSPQIRSLHWKCYQNICLPSTFNSEFLVELDMSFSKLQKLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLHRCSSLVELPSFGNATKLEILNLENCSSLVKLPPSINANNLQELSLTNCSRVVELPAIENATNLWKLNLLNCSSLIELPLSIGTATNLKHLDFRGCSSLVKLPSSIGDMTNLEVFYLSNCSNLVELPSSIGNLRKLTLLLMRGCSKLETLPTNINLKSLHTLNLIDCSRLKSFPEISTHIKYLRLIGTAIKEVPLSIMSWSPLAHFQISYFESLKEFPHALDIITELQLSKDIQEVPPWVKRMSRLRALRLNNCNNLVSLPQLPDSLAYLYADNCKSLERLDCCFNNPEIRLYFPKCFKLNQEARDLIMHTSTRNFAMLPGTQVPACFNHRATSGDSLKIKLKESPLPTTLTFKACIMLVNEEMSYDLKSMSVDIVIRDEQNDLKVQCTPSYHQCTEIYVLTEHIYTFELEVEEVTSTELVFEFTSVNESICKIGECGILQRETRSLRRSSSPDLSPESSRVSSCDHC |
| NAD+ hydrolase (NADase) | B | 1221 | Arabidopsis Thaliana , Hyaloperonospora Arabidopsidis (Strain Emoy2) | MGSAMSLGCSKRKATNQDVDSESRKRRKICSTNDAENCRFIQDESSWKHPWSLCANSVVNDTKDTKSSALSLPSPPTSVSRIWKHQVFPSFHGADVRKTILSHILESFRRKGIDPFIDNNIERSKSIGHELKEAIKGSKIAIVLLSKNYASSSWCLDELAEIMKCRELLGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCKGKTKEYVERWRKALEDVATIAGYHSHKWRNEADMIEKIATDVSNMLNSFKPSRDFNGLVGMRAHMDMLEQLLRLVLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCYPRPCFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAKETRWFGPGSRIIITTEDLGVLKAHGINHVYKVGYPSNDEAFQIFCMNAFGQKQPHEGFDEIAREVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLKTSLDGKIGSIIQFSYDALCDEDKYLFLYIACLFNKESTTKVEGLLGKFLDVRQGLHILAQKSLISIEDGNIYMHTLLEQFGRETSRKQFIHHGYTKHQLLVGERDICEVLNDDTIDSRRFIGINLDLYKNVEELNISEKALERIHDFQFVRINGKNHALHERLQGLIYQSPQIRSLHWKCYQNICLPSTFNSEFLVELDMSFSKLQKLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLHRCSSLVELPSFGNATKLEILNLENCSSLVKLPPSINANNLQELSLTNCSRVVELPAIENATNLWKLNLLNCSSLIELPLSIGTATNLKHLDFRGCSSLVKLPSSIGDMTNLEVFYLSNCSNLVELPSSIGNLRKLTLLLMRGCSKLETLPTNINLKSLHTLNLIDCSRLKSFPEISTHIKYLRLIGTAIKEVPLSIMSWSPLAHFQISYFESLKEFPHALDIITELQLSKDIQEVPPWVKRMSRLRALRLNNCNNLVSLPQLPDSLAYLYADNCKSLERLDCCFNNPEIRLYFPKCFKLNQEARDLIMHTSTRNFAMLPGTQVPACFNHRATSGDSLKIKLKESPLPTTLTFKACIMLVNEEMSYDLKSMSVDIVIRDEQNDLKVQCTPSYHQCTEIYVLTEHIYTFELEVEEVTSTELVFEFTSVNESICKIGECGILQRETRSLRRSSSPDLSPESSRVSSCDHC |
| NAD+ hydrolase (NADase) | C | 1221 | Arabidopsis Thaliana , Hyaloperonospora Arabidopsidis (Strain Emoy2) | MGSAMSLGCSKRKATNQDVDSESRKRRKICSTNDAENCRFIQDESSWKHPWSLCANSVVNDTKDTKSSALSLPSPPTSVSRIWKHQVFPSFHGADVRKTILSHILESFRRKGIDPFIDNNIERSKSIGHELKEAIKGSKIAIVLLSKNYASSSWCLDELAEIMKCRELLGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCKGKTKEYVERWRKALEDVATIAGYHSHKWRNEADMIEKIATDVSNMLNSFKPSRDFNGLVGMRAHMDMLEQLLRLVLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCYPRPCFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAKETRWFGPGSRIIITTEDLGVLKAHGINHVYKVGYPSNDEAFQIFCMNAFGQKQPHEGFDEIAREVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLKTSLDGKIGSIIQFSYDALCDEDKYLFLYIACLFNKESTTKVEGLLGKFLDVRQGLHILAQKSLISIEDGNIYMHTLLEQFGRETSRKQFIHHGYTKHQLLVGERDICEVLNDDTIDSRRFIGINLDLYKNVEELNISEKALERIHDFQFVRINGKNHALHERLQGLIYQSPQIRSLHWKCYQNICLPSTFNSEFLVELDMSFSKLQKLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLHRCSSLVELPSFGNATKLEILNLENCSSLVKLPPSINANNLQELSLTNCSRVVELPAIENATNLWKLNLLNCSSLIELPLSIGTATNLKHLDFRGCSSLVKLPSSIGDMTNLEVFYLSNCSNLVELPSSIGNLRKLTLLLMRGCSKLETLPTNINLKSLHTLNLIDCSRLKSFPEISTHIKYLRLIGTAIKEVPLSIMSWSPLAHFQISYFESLKEFPHALDIITELQLSKDIQEVPPWVKRMSRLRALRLNNCNNLVSLPQLPDSLAYLYADNCKSLERLDCCFNNPEIRLYFPKCFKLNQEARDLIMHTSTRNFAMLPGTQVPACFNHRATSGDSLKIKLKESPLPTTLTFKACIMLVNEEMSYDLKSMSVDIVIRDEQNDLKVQCTPSYHQCTEIYVLTEHIYTFELEVEEVTSTELVFEFTSVNESICKIGECGILQRETRSLRRSSSPDLSPESSRVSSCDHC |
| NAD+ hydrolase (NADase) | D | 1221 | Arabidopsis Thaliana , Hyaloperonospora Arabidopsidis (Strain Emoy2) | MGSAMSLGCSKRKATNQDVDSESRKRRKICSTNDAENCRFIQDESSWKHPWSLCANSVVNDTKDTKSSALSLPSPPTSVSRIWKHQVFPSFHGADVRKTILSHILESFRRKGIDPFIDNNIERSKSIGHELKEAIKGSKIAIVLLSKNYASSSWCLDELAEIMKCRELLGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCKGKTKEYVERWRKALEDVATIAGYHSHKWRNEADMIEKIATDVSNMLNSFKPSRDFNGLVGMRAHMDMLEQLLRLVLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCYPRPCFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAKETRWFGPGSRIIITTEDLGVLKAHGINHVYKVGYPSNDEAFQIFCMNAFGQKQPHEGFDEIAREVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLKTSLDGKIGSIIQFSYDALCDEDKYLFLYIACLFNKESTTKVEGLLGKFLDVRQGLHILAQKSLISIEDGNIYMHTLLEQFGRETSRKQFIHHGYTKHQLLVGERDICEVLNDDTIDSRRFIGINLDLYKNVEELNISEKALERIHDFQFVRINGKNHALHERLQGLIYQSPQIRSLHWKCYQNICLPSTFNSEFLVELDMSFSKLQKLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLHRCSSLVELPSFGNATKLEILNLENCSSLVKLPPSINANNLQELSLTNCSRVVELPAIENATNLWKLNLLNCSSLIELPLSIGTATNLKHLDFRGCSSLVKLPSSIGDMTNLEVFYLSNCSNLVELPSSIGNLRKLTLLLMRGCSKLETLPTNINLKSLHTLNLIDCSRLKSFPEISTHIKYLRLIGTAIKEVPLSIMSWSPLAHFQISYFESLKEFPHALDIITELQLSKDIQEVPPWVKRMSRLRALRLNNCNNLVSLPQLPDSLAYLYADNCKSLERLDCCFNNPEIRLYFPKCFKLNQEARDLIMHTSTRNFAMLPGTQVPACFNHRATSGDSLKIKLKESPLPTTLTFKACIMLVNEEMSYDLKSMSVDIVIRDEQNDLKVQCTPSYHQCTEIYVLTEHIYTFELEVEEVTSTELVFEFTSVNESICKIGECGILQRETRSLRRSSSPDLSPESSRVSSCDHC |
| Avirulence protein ATR1 | E | 311 | Arabidopsis Thaliana , Hyaloperonospora Arabidopsidis (Strain Emoy2) | MRVCYFVLVPSVALAVIATESSETSGTIVHVFPLRDVADHRNDALINRALRAQTALDDDEERWPFGPSAVEALIETIDRHGRVSLNDEAKMKKVVRTWKKLIERDDLIGEIGKHYFEAPGPLHDTYDEALATRLVTTYSDRGVARAILHTRPSDPLSKKAGQAHRLEEAVASLWKGRGYTSDNVVSSIATGHDVDFFAPTAFTFLVKCVESEDDANNAIFEYFGSNPSRYFSAVLHAMEKPDADSRVLESSKKWMFQCYAQKQFPTPVFERTLAAYQSEDYAIRGARNHYEKLSLSQIEELVEEYSRIYSV |
| Avirulence protein ATR1 | H | 311 | Arabidopsis Thaliana , Hyaloperonospora Arabidopsidis (Strain Emoy2) | MRVCYFVLVPSVALAVIATESSETSGTIVHVFPLRDVADHRNDALINRALRAQTALDDDEERWPFGPSAVEALIETIDRHGRVSLNDEAKMKKVVRTWKKLIERDDLIGEIGKHYFEAPGPLHDTYDEALATRLVTTYSDRGVARAILHTRPSDPLSKKAGQAHRLEEAVASLWKGRGYTSDNVVSSIATGHDVDFFAPTAFTFLVKCVESEDDANNAIFEYFGSNPSRYFSAVLHAMEKPDADSRVLESSKKWMFQCYAQKQFPTPVFERTLAAYQSEDYAIRGARNHYEKLSLSQIEELVEEYSRIYSV |
| Avirulence protein ATR1 | F | 311 | Arabidopsis Thaliana , Hyaloperonospora Arabidopsidis (Strain Emoy2) | MRVCYFVLVPSVALAVIATESSETSGTIVHVFPLRDVADHRNDALINRALRAQTALDDDEERWPFGPSAVEALIETIDRHGRVSLNDEAKMKKVVRTWKKLIERDDLIGEIGKHYFEAPGPLHDTYDEALATRLVTTYSDRGVARAILHTRPSDPLSKKAGQAHRLEEAVASLWKGRGYTSDNVVSSIATGHDVDFFAPTAFTFLVKCVESEDDANNAIFEYFGSNPSRYFSAVLHAMEKPDADSRVLESSKKWMFQCYAQKQFPTPVFERTLAAYQSEDYAIRGARNHYEKLSLSQIEELVEEYSRIYSV |
| Avirulence protein ATR1 | G | 311 | Arabidopsis Thaliana , Hyaloperonospora Arabidopsidis (Strain Emoy2) | MRVCYFVLVPSVALAVIATESSETSGTIVHVFPLRDVADHRNDALINRALRAQTALDDDEERWPFGPSAVEALIETIDRHGRVSLNDEAKMKKVVRTWKKLIERDDLIGEIGKHYFEAPGPLHDTYDEALATRLVTTYSDRGVARAILHTRPSDPLSKKAGQAHRLEEAVASLWKGRGYTSDNVVSSIATGHDVDFFAPTAFTFLVKCVESEDDANNAIFEYFGSNPSRYFSAVLHAMEKPDADSRVLESSKKWMFQCYAQKQFPTPVFERTLAAYQSEDYAIRGARNHYEKLSLSQIEELVEEYSRIYSV |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2020-08-13 Deposition Author(s): Chai, J.J. , Han, Z.F. , Jirschitzka, J. , Lapin, D. , Liu, L. , Logemann, E. , Ma, S.C. , Parker, J.E. , Schulzelefert, P. , Song, W. , Sun, Y. , Wang, J. , Yu, D.L. , Zhang, X.X.