7A3O
Crystal structure of dengue 1 virus envelope glycoprotein in complex with the scfv fragment of the broadly neutralizing human antibody ede1 c10
PDB DOI: 10.2210/pdb7a3o/pdb
Classification: VIRAL PROTEIN Organism(s): Dengue Virus 1 , Homo Sapiens
Deposited: 2020-08-18 Deposition Author(s): Duquerroy, S. , Guardado-Calvo, P. , Rey, F.A. , Rouvinski, A. , Sharma, A. , Vaney, M.C.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.8 Å
Crystal structure of dengue 1 virus envelope glycoprotein in complex with the scfv fragment of the broadly neutralizing human antibody ede1 c10
Duquerroy, S. , Guardado-Calvo, P. , Rey, F.A. , Rouvinski, A. , Sharma, A. , Vaney, M.C.
Primary Citation of Related Structures: 7A3O
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Core protein | A | 432 | Dengue Virus 1 , Homo Sapiens | MRCVGIGNRDFVEGLSGATWVDVVLEHGSCVTTMAKNKPTLDIELLKTEVTNPAVLRKLCIEAKISNTTTDSRCPTQGEATLVEEQDANFVCRRTVVDRGWGNGCGLFGKGSLLTCAKFKCVTKLEGKIVQYENLKYSVIVTVHTGDQHQVGNETTEHGTIATITPQAPTSEIQLTDYGTLTLDCSPRTGLDFNEVVLLTMKEKSWLVHKQWFLDLPLPWTSGASTSQETWNRQDLLVTFKTAHAKKQEVVVLGSQEGAMHTALTGATEIQTSGTTTIFAGHLKCRLKMDKLTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQVKYEGTDAPCKIPFSTQDEKGVTQNGRLITANPIVTDKEKPINIETEPPFGESYIIVGAGEKALKLSWFKKGAADDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK |
| Single chain variable fragment (scFv) from antibody EDE1 C10 | H | 144 | Dengue Virus 1 , Homo Sapiens | MAEVQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTVSSGTGGSGGGGSGGGG |
| Single chain variable fragment (scFv) from antibody EDE1 C10 | L | 154 | Dengue Virus 1 , Homo Sapiens | SGGGASQSALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVLAAADDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2020-08-18 Deposition Author(s): Duquerroy, S. , Guardado-Calvo, P. , Rey, F.A. , Rouvinski, A. , Sharma, A. , Vaney, M.C.