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FASTA Sequence PDB Format mmCIF Format
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6ZY3

Cryo-em structure of mlafedb in complex with phospholipid

PDB DOI: 10.2210/pdb6zy3/pdb

Classification: LIPID TRANSPORT
Organism(s): Adineta Vaga , Sphingobacterium Daejeonense , Uncultured Archaeon , Brevibacterium Sterolicum

Deposited: 2020-07-30
Deposition Author(s): Dong, C.J. , Dong, H.H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.3 Å

6zy3
Literature

Cryo-em structure of mlafedb in complex with phospholipid

Dong, C.J. , Dong, H.H.

Primary Citation of Related Structures: 6ZY3


Proteins
Molecule Chains Sequence Length Organism Sequence
YrbD protein A 183 Adineta Vaga , Sphingobacterium Daejeonense , Uncultured Archaeon , Brevibacterium Sterolicum MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSIGGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFEDPELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNKNSGDAPAAAPGNNETTEPVGTTK
YrbD protein D 183 Adineta Vaga , Sphingobacterium Daejeonense , Uncultured Archaeon , Brevibacterium Sterolicum MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSIGGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFEDPELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNKNSGDAPAAAPGNNETTEPVGTTK
YrbD protein I 183 Adineta Vaga , Sphingobacterium Daejeonense , Uncultured Archaeon , Brevibacterium Sterolicum MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSIGGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFEDPELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNKNSGDAPAAAPGNNETTEPVGTTK
YrbD protein J 183 Adineta Vaga , Sphingobacterium Daejeonense , Uncultured Archaeon , Brevibacterium Sterolicum MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSIGGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFEDPELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNKNSGDAPAAAPGNNETTEPVGTTK
YrbD protein K 183 Adineta Vaga , Sphingobacterium Daejeonense , Uncultured Archaeon , Brevibacterium Sterolicum MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSIGGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFEDPELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNKNSGDAPAAAPGNNETTEPVGTTK
YrbD protein L 183 Adineta Vaga , Sphingobacterium Daejeonense , Uncultured Archaeon , Brevibacterium Sterolicum MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSIGGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFEDPELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNKNSGDAPAAAPGNNETTEPVGTTK
ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component B 105 Adineta Vaga , Sphingobacterium Daejeonense , Uncultured Archaeon , Brevibacterium Sterolicum MSESLSWMQTGDTLALSGELDQDVLLPLWEMREEAVKGITCIDLSRVSRVDTGGLALLLHLIDLAKKQGNNVTLQGVNDKVYTLAKLYNLPADVLPRHHHHHHHH
ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component C 105 Adineta Vaga , Sphingobacterium Daejeonense , Uncultured Archaeon , Brevibacterium Sterolicum MSESLSWMQTGDTLALSGELDQDVLLPLWEMREEAVKGITCIDLSRVSRVDTGGLALLLHLIDLAKKQGNNVTLQGVNDKVYTLAKLYNLPADVLPRHHHHHHHH
Toluene tolerance protein Ttg2A F 269 Adineta Vaga , Sphingobacterium Daejeonense , Uncultured Archaeon , Brevibacterium Sterolicum MEQSVANLVDMRDVSFTRGNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAWILADKKIVAHGSAQALQANPDPRVRQFLDGIADGPVPFRYPAGDYHADLLPGS
Toluene tolerance protein Ttg2A G 269 Adineta Vaga , Sphingobacterium Daejeonense , Uncultured Archaeon , Brevibacterium Sterolicum MEQSVANLVDMRDVSFTRGNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAWILADKKIVAHGSAQALQANPDPRVRQFLDGIADGPVPFRYPAGDYHADLLPGS
Uncharacterized protein E 260 Adineta Vaga , Sphingobacterium Daejeonense , Uncultured Archaeon , Brevibacterium Sterolicum MLLNALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFGN
Uncharacterized protein H 260 Adineta Vaga , Sphingobacterium Daejeonense , Uncultured Archaeon , Brevibacterium Sterolicum MLLNALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFGN
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-07-30
Deposition Author(s): Dong, C.J. , Dong, H.H.