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FASTA Sequence PDB Format mmCIF Format
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6Y60

Structure of human polyomavirus 12 vp1 in complex with 3'-sialyllactosamine

PDB DOI: 10.2210/pdb6y60/pdb

Classification: VIRAL PROTEIN
Organism(s): Human Polyomavirus 12

Deposited: 2020-02-26
Deposition Author(s): Rustmeier, N.H. , Stehle, T. , Stroh, L.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.798 Å

6y60
Literature

Structure of human polyomavirus 12 vp1 in complex with 3'-sialyllactosamine

Rustmeier, N.H. , Stehle, T. , Stroh, L.J.

Primary Citation of Related Structures: 6Y60


Proteins
Molecule Chains Sequence Length Organism Sequence
Capsid protein VP1 AAA 277 Human Polyomavirus 12 GSHMGGIEVLDVKTGDDSITQIEAFLNPRMGVNDETNTWYGFSEQVTVATARETDRPPKEQMPYYSCARIPLPLLNEDMTCNTLLMWEAVSVKTEVIGSNTLMNVHDYMTRTDNGVGHPVVGSTYHMFAVGGEPLDLQGIQQSHLVQYPEGLIVPKSVTDVTAKIQCLDPSAKAKLDKDGKYPIETWSPDPSRNENTRYFGNYYGGLTTPPVLTFTNTVTTILLDENGVGPLCKGDGLFLSCCDVMGWFTAGSGTHQRFRGLPRYFNVQLRKRAVRN
Capsid protein VP1 BBB 277 Human Polyomavirus 12 GSHMGGIEVLDVKTGDDSITQIEAFLNPRMGVNDETNTWYGFSEQVTVATARETDRPPKEQMPYYSCARIPLPLLNEDMTCNTLLMWEAVSVKTEVIGSNTLMNVHDYMTRTDNGVGHPVVGSTYHMFAVGGEPLDLQGIQQSHLVQYPEGLIVPKSVTDVTAKIQCLDPSAKAKLDKDGKYPIETWSPDPSRNENTRYFGNYYGGLTTPPVLTFTNTVTTILLDENGVGPLCKGDGLFLSCCDVMGWFTAGSGTHQRFRGLPRYFNVQLRKRAVRN
Capsid protein VP1 CCC 277 Human Polyomavirus 12 GSHMGGIEVLDVKTGDDSITQIEAFLNPRMGVNDETNTWYGFSEQVTVATARETDRPPKEQMPYYSCARIPLPLLNEDMTCNTLLMWEAVSVKTEVIGSNTLMNVHDYMTRTDNGVGHPVVGSTYHMFAVGGEPLDLQGIQQSHLVQYPEGLIVPKSVTDVTAKIQCLDPSAKAKLDKDGKYPIETWSPDPSRNENTRYFGNYYGGLTTPPVLTFTNTVTTILLDENGVGPLCKGDGLFLSCCDVMGWFTAGSGTHQRFRGLPRYFNVQLRKRAVRN
Capsid protein VP1 DDD 277 Human Polyomavirus 12 GSHMGGIEVLDVKTGDDSITQIEAFLNPRMGVNDETNTWYGFSEQVTVATARETDRPPKEQMPYYSCARIPLPLLNEDMTCNTLLMWEAVSVKTEVIGSNTLMNVHDYMTRTDNGVGHPVVGSTYHMFAVGGEPLDLQGIQQSHLVQYPEGLIVPKSVTDVTAKIQCLDPSAKAKLDKDGKYPIETWSPDPSRNENTRYFGNYYGGLTTPPVLTFTNTVTTILLDENGVGPLCKGDGLFLSCCDVMGWFTAGSGTHQRFRGLPRYFNVQLRKRAVRN
Capsid protein VP1 EEE 277 Human Polyomavirus 12 GSHMGGIEVLDVKTGDDSITQIEAFLNPRMGVNDETNTWYGFSEQVTVATARETDRPPKEQMPYYSCARIPLPLLNEDMTCNTLLMWEAVSVKTEVIGSNTLMNVHDYMTRTDNGVGHPVVGSTYHMFAVGGEPLDLQGIQQSHLVQYPEGLIVPKSVTDVTAKIQCLDPSAKAKLDKDGKYPIETWSPDPSRNENTRYFGNYYGGLTTPPVLTFTNTVTTILLDENGVGPLCKGDGLFLSCCDVMGWFTAGSGTHQRFRGLPRYFNVQLRKRAVRN
Capsid protein VP1 FFF 277 Human Polyomavirus 12 GSHMGGIEVLDVKTGDDSITQIEAFLNPRMGVNDETNTWYGFSEQVTVATARETDRPPKEQMPYYSCARIPLPLLNEDMTCNTLLMWEAVSVKTEVIGSNTLMNVHDYMTRTDNGVGHPVVGSTYHMFAVGGEPLDLQGIQQSHLVQYPEGLIVPKSVTDVTAKIQCLDPSAKAKLDKDGKYPIETWSPDPSRNENTRYFGNYYGGLTTPPVLTFTNTVTTILLDENGVGPLCKGDGLFLSCCDVMGWFTAGSGTHQRFRGLPRYFNVQLRKRAVRN
Capsid protein VP1 GGG 277 Human Polyomavirus 12 GSHMGGIEVLDVKTGDDSITQIEAFLNPRMGVNDETNTWYGFSEQVTVATARETDRPPKEQMPYYSCARIPLPLLNEDMTCNTLLMWEAVSVKTEVIGSNTLMNVHDYMTRTDNGVGHPVVGSTYHMFAVGGEPLDLQGIQQSHLVQYPEGLIVPKSVTDVTAKIQCLDPSAKAKLDKDGKYPIETWSPDPSRNENTRYFGNYYGGLTTPPVLTFTNTVTTILLDENGVGPLCKGDGLFLSCCDVMGWFTAGSGTHQRFRGLPRYFNVQLRKRAVRN
Capsid protein VP1 HHH 277 Human Polyomavirus 12 GSHMGGIEVLDVKTGDDSITQIEAFLNPRMGVNDETNTWYGFSEQVTVATARETDRPPKEQMPYYSCARIPLPLLNEDMTCNTLLMWEAVSVKTEVIGSNTLMNVHDYMTRTDNGVGHPVVGSTYHMFAVGGEPLDLQGIQQSHLVQYPEGLIVPKSVTDVTAKIQCLDPSAKAKLDKDGKYPIETWSPDPSRNENTRYFGNYYGGLTTPPVLTFTNTVTTILLDENGVGPLCKGDGLFLSCCDVMGWFTAGSGTHQRFRGLPRYFNVQLRKRAVRN
Capsid protein VP1 III 277 Human Polyomavirus 12 GSHMGGIEVLDVKTGDDSITQIEAFLNPRMGVNDETNTWYGFSEQVTVATARETDRPPKEQMPYYSCARIPLPLLNEDMTCNTLLMWEAVSVKTEVIGSNTLMNVHDYMTRTDNGVGHPVVGSTYHMFAVGGEPLDLQGIQQSHLVQYPEGLIVPKSVTDVTAKIQCLDPSAKAKLDKDGKYPIETWSPDPSRNENTRYFGNYYGGLTTPPVLTFTNTVTTILLDENGVGPLCKGDGLFLSCCDVMGWFTAGSGTHQRFRGLPRYFNVQLRKRAVRN
Capsid protein VP1 JJJ 277 Human Polyomavirus 12 GSHMGGIEVLDVKTGDDSITQIEAFLNPRMGVNDETNTWYGFSEQVTVATARETDRPPKEQMPYYSCARIPLPLLNEDMTCNTLLMWEAVSVKTEVIGSNTLMNVHDYMTRTDNGVGHPVVGSTYHMFAVGGEPLDLQGIQQSHLVQYPEGLIVPKSVTDVTAKIQCLDPSAKAKLDKDGKYPIETWSPDPSRNENTRYFGNYYGGLTTPPVLTFTNTVTTILLDENGVGPLCKGDGLFLSCCDVMGWFTAGSGTHQRFRGLPRYFNVQLRKRAVRN
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2020-02-26
Deposition Author(s): Rustmeier, N.H. , Stehle, T. , Stroh, L.J.