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FASTA Sequence PDB Format mmCIF Format
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6XP6

3c11-dq2-glia-a2 complex

PDB DOI: 10.2210/pdb6xp6/pdb

Classification: PEPTIDE BINDING PROTEIN
Organism(s): Salmonella Enterica , Exiguobacterium Sp. Kkbo11

Deposited: 2020-07-08
Deposition Author(s): Petersen, J. , Rossjohn, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.4 Å

Literature

3c11-dq2-glia-a2 complex

Petersen, J. , Rossjohn, J.

Primary Citation of Related Structures: 6XP6


Proteins
Molecule Chains Sequence Length Organism Sequence
MHC class II HLA-DQ-alpha chain A 191 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 EDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFDPQFALTNIAVLKHNLNSLIKRSNSTAATNEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTLLPSAEESYDCKVEHWGLDKPLLKHWEPETSGDDDDK
MHC class II HLA-DQ-alpha chain D 191 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 EDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFDPQFALTNIAVLKHNLNSLIKRSNSTAATNEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTLLPSAEESYDCKVEHWGLDKPLLKHWEPETSGDDDDK
MHC class II HLA-DQ-beta-1 B 201 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 SRDSPEDFVYQFKGMCYFTNGTERVRLVSRSIYNREEIVRFDSDVGEFRAVTLLGLPAAEYWNSQKDILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRWFRNDQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWRAQSTGGDDDDK
MHC class II HLA-DQ-beta-1 E 201 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 SRDSPEDFVYQFKGMCYFTNGTERVRLVSRSIYNREEIVRFDSDVGEFRAVTLLGLPAAEYWNSQKDILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRWFRNDQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWRAQSTGGDDDDK
3.C11 IgH Fab H 224 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 QVQLVQSGAEVKKPGSSVKVSCKASGGTVRSRVHAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARDVQRMGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
3.C11 IgH Fab J 224 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 QVQLVQSGAEVKKPGSSVKVSCKASGGTVRSRVHAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARDVQRMGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
3.C11 IgK Fab G 214 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 DIQMTQSPSSVSTSVGDRVTITCRASQDISNWLAWYQQKPGKAPKLLIYDSSTLQSGVPSRFSGSGSGTDFTLTISTLQPEDFATYYCQQFNSYPLTFGGGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
3.C11 IgK Fab I 214 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 DIQMTQSPSSVSTSVGDRVTITCRASQDISNWLAWYQQKPGKAPKLLIYDSSTLQSGVPSRFSGSGSGTDFTLTISTLQPEDFATYYCQQFNSYPLTFGGGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
DQ2-glia-a2 peptide C 26 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 AAPQPELPYPQPGSGGSIEGRGGSGA
DQ2-glia-a2 peptide F 26 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 AAPQPELPYPQPGSGGSIEGRGGSGA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2020-07-08
Deposition Author(s): Petersen, J. , Rossjohn, J.