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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6XJQ

Crystal structure of a self-alkylating ribozyme - alkylated form with biotinylated epoxide substrate

PDB DOI: 10.2210/pdb6xjq/pdb

Classification: RNA/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2020-06-24
Deposition Author(s): Koirala, D. , Piccirilli, J.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.708 Å

6xjq
Literature

Crystal structure of a self-alkylating ribozyme - alkylated form with biotinylated epoxide substrate

Koirala, D. , Piccirilli, J.A.

Primary Citation of Related Structures: 6XJQ


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
Self-alkylating ribozyme (58-MER) a 58 NA GGCCGCUCCAGAAGAGGGCCCCCUUGCCCGUUAUCGGGGGCUAGGCUCGAUGUCGGCC
Self-alkylating ribozyme (58-MER) b 58 NA GGCCGCUCCAGAAGAGGGCCCCCUUGCCCGUUAUCGGGGGCUAGGCUCGAUGUCGGCC

Proteins
Molecule Chains Sequence Length Organism Sequence
Fab HAVx Heavy Chain C 258 Homo Sapiens , Synthetic Construct MKKNIAFLLASMFVFSIATNAYAEISEVQLVESGGGLVQPGGSLRLSCAASGFSLSSSSMHWVRQAPGKGLEWVASISPYSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTKYHYKNYYWWALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
Fab HAVx Heavy Chain H 258 Homo Sapiens , Synthetic Construct MKKNIAFLLASMFVFSIATNAYAEISEVQLVESGGGLVQPGGSLRLSCAASGFSLSSSSMHWVRQAPGKGLEWVASISPYSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTKYHYKNYYWWALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
Fab HAVx Light Chain D 238 Homo Sapiens , Synthetic Construct MKKNIAFLLASMFVFSIATNAYASDIQMTQSPSSLSASVGDRVTITCRASQSVYYSVAWYQQKPGKAPKLLIYSASYLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYRRRPITFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Fab HAVx Light Chain L 238 Homo Sapiens , Synthetic Construct MKKNIAFLLASMFVFSIATNAYASDIQMTQSPSSLSASVGDRVTITCRASQSVYYSVAWYQQKPGKAPKLLIYSASYLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYRRRPITFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2020-06-24
Deposition Author(s): Koirala, D. , Piccirilli, J.A.