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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6X89

Vigna radiata mitochondrial complex i*

PDB DOI: 10.2210/pdb6x89/pdb

Classification: MEMBRANE PROTEIN
Organism(s): Vigna Radiata

Deposited: 2020-06-01
Deposition Author(s): Guo, F. , Letts, J.A. , Maldonado, M. , Padavannil, A. , Zhou, L.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.9 Å

6x89
Literature

Vigna radiata mitochondrial complex i*

Guo, F. , Letts, J.A. , Maldonado, M. , Padavannil, A. , Zhou, L.

Primary Citation of Related Structures: 6X89


Proteins
Molecule Chains Sequence Length Organism Sequence
Unknown Peptide A 18 Vigna Radiata XXXXXXXXXXXXXXXXXX
NDUS3 S3 190 Vigna Radiata MDNQSIFKYSWETLPKKWVKKMERSEHGNRFDTKTDYLFQLLCFLKLHTYTRVQVLIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISSVVSLFPSAGWWEREVWDMFGVSSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial S4 146 Vigna Radiata MANTLQRALRATMARRFSTQALVETKPGEIGMVSGIPQEHLRRRVVIYSPARTASQQGSGKVGRWKINFLSTQKWENPLMGWTSTGDPYAHVGDSALTFDSAEAAKAFAEKHGWEYSVKKRHTPLLKVKSYADNFKWKGFPKPAEE
NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial S6 103 Vigna Radiata MASSVLRNLMRFSSPRNTSTRSFSLVTSQISNHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDTNPALGHPIEFICLDLPEPAVCKYCGLRYVQDHHH
NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial S7 213 Vigna Radiata MALLSRASSRIYQVHSYQRALSLHTTLPALNASTSTHTPTPYAPPPPPSASSPVGVSKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKINRRKDFLHWWTK
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial S8 222 Vigna Radiata MAAILARKSLLALRARQLAVSGQGLHSSQSYGLRLSAHSFSTKLEDEQREQLAKEISKDWSSVFERSINTLFLTEMVRGLMLTLKYFFETKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial V1 491 Vigna Radiata MRGILSLRSALVQHRSEKLGLGLRQFSTQGASTPTSPQPPPPPASPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVIKGTDWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNERKNLEKARQEAYAAGLLGKNACGSGYDFDVHIHFGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFAGFGRKNNAGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKSICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWTIMERMKVGNAKLEEIDMLQELTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRENAERELLQATG
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial V2 251 Vigna Radiata MLARLAANRFNEIRHIFRQPSRAFSTALNYHLDSPDNNPNLPWEFTEPNKAKVTEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVANIIEVPPIRVYEVATFYSMFNRAKVGKYHLLVCGTTPCMIRGSRGIEEALLKHLGVKRNEVTPDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPEKVVEIVEKLRKGEKPPHGTQNPLRIRSGPEGGNTTLLGEPKPPPCRDLDAC
NU1M 1M 325 Vigna Radiata MYIAVPAEILGIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVAWAVVPFDYGMVLSDSNIGLLYLFAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILITVLICVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAESVAGYNVEYSSMGSALFFLGEYANMILMSGLCTSLSLGGWLPILDLPIFKRIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGWKVFLPLSLAWVVAVSGVSVTFPWLP
NU2M 2M 488 Vigna Radiata MFNLFLAVYPEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAHLFRNNLFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDSIAMYLAIELQSLCFYVMAASKRKSEFSTEAGLKYLILGAFSSGILLFGCSMIYGSTGATHFDQLAKILTGYEITGARSSGIFMGILFIAVGSLFKITAVPFHMWAPDIYEGSPTPVTAFLSIAPKISIFANISRVSIYGSYGATLQQIFCFCSIASMILGALAAMAQTKVKRLLAYSSIGHVGYICTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLALRQTRVKYIADLGALAKTNPILAITFSITMFSYVGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIGCFYYIRLAKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFPYPSPLFSVTHQMALSLYL
NU3M 3M 118 Vigna Radiata MSEFAPICIYLVISLLVSLILLGLPFLFASNSSTYPEKLSAYECGFDPFGDARSRFDIRFYLVSILFIIFDPEVTFSFPWAVSLNKIDPFGSWSMMAFLLILTIGSLYEWKRGALDWE
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 A2 98 Vigna Radiata MAWRGQLSKNIKELRFLMCQSSSASASARAFVEKNYKELKTLNPKLPILIRECSGVEPQLWARYDLGVEKAIKLEGLSEAQISKALEDLAKAGQSSKA
NU4L 4L 100 Vigna Radiata MDPIKYFTFSMIIFILGIRGILLNRRNILIMLMSIELMLLAVNSNFLVFSVSLDDMMGQSFALLVLTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
NU6M 6M 205 Vigna Radiata MILSVLSSLALVSGLMVVRAKNPVHSVLFFILVFCDTSGLLLLLGLDFSAMIFLVVYIGAIAVLFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQINTTSLIYTVYAGKVRSWTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAIDFRRTIMRRTTDPLTID
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 A1 65 Vigna Radiata MNLRWMEAVLPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDLWDVAMERRDKKLHEQAASSSN
uncharacterized protein LOC106754061 A3 63 Vigna Radiata MAVMEKLKMFVVQEPVVAASCLIAGFGLFLPAVVRPILDSYQATKQPPQPALSDVVAGMTGKK
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B A8 106 Vigna Radiata MASAVDASGNPIPSSSVLMASSKHIGIRCHSENLDFLKCKKKDPNPEKCLDKGRDVTRCVLGLLKDLHQKCTKEMDDYVGCMYYHTNEFDLCRKEQQAFEKKCSLE
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A AM 143 Vigna Radiata MTEAYIRNKPGMVSVKDMPVLQDGPPPGGFAPVRFARRIPNKGPSAVAIFLAAFGTFSWGMYQVGQGNKIRRALKEEKYAARRSILPVLQAEEDERFVREWHKYLAYEAEVMKDVPGWKVGESVYNSGRWVPPASGELRPDIW
Unknown Peptide B 25 Vigna Radiata XXXXXXXXXXXXXXXXXXXXXXXXX
Unknown Peptide C 43 Vigna Radiata XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
NDUC2 C2 81 Vigna Radiata MVLSATTIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLLKWEAQVEQDLDKMLEKAKAANERRYIDGDDD
Protein At2g27730, mitochondrial P2 115 Vigna Radiata MAARVAARYGSRRLFSSGSGKILSEEEKAAENAYFKKAEQDKLEKLARKGPQPEASSGGSVIDAKPSGSGHTGASAERVSTDKHRNYAVVAGTITILGALGWYLKGTAKKPEVQD
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial A5 169 Vigna Radiata MFLRAVARPLMAKVKASTGIVGLEVVPNAREVLIGLYSKTLKEIQKVPEDEGYRKAVESFTKHRLSVCKEEEDWEAIEKRLGCGQVEELIEEAQDELKLISYMIEWDPWGVPDDYECEVIENDAPVPKHVPLHRPPPLPTEFHKTLEALSSQSGKDIPGASSTESPSKT
serine/arginine-rich-splicing factor SR34 isoform X2 S5 399 Vigna Radiata MASGWGITGNKGRCYDFWMDFSECMSRCREPKDCGLLREDYLECLHHSKEFQRRNRIYKEEQRKIRAAAKKAKDDGVVKEHHYLHGNTTDSNPHLSKVKKMSRRSSRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAHGGRGHSSSRDRHSSHSNGRAGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKGYVRVREYDSRRDSSRSPSRGPSHSRGRSYSRSRSRSRSYSRDRSQSKSPKGKSSQRSPPAKSPSRSPAARSRSRSRSRSLSGSRSRSRSPLPPRNKSPKRGSASRSPSRSRSRSKSLSR
NDUX1 X1 101 Vigna Radiata MNTDITASTKPEYPVVDRNPPFTKVVGNFSTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGVMGGFMYAYQNSAGRLMGFFPNDDEVARHNKK
gamma carbonic anhydrase 1, mitochondrial G1 270 Vigna Radiata MGTLGRAFYAVGFWIRETGQAIDRLGSRLQGNYLFQEQLSRHRPLMNLFDKYPSVHKDAFVAPSASLLGDVHVGPASSIWYGCVLRGDVNGIVIGSGTNIQDNSLVHVAKSNLTGKVLPTIIGDNVTVGHSAVLQGCTVEDEAFIGMGATLLDGVYVEKHAMVAAGALVRQNTRIPYGEVWGGNPAKFLRKLTEDEMAFFSQSALNYSNLAQAHAAENAKELEETEFVKVLHKKFAPRGEEYDSILDGGQETPAKLNLQDNVLLDKAPKA
gamma carbonic anhydrase 1, mitochondrial-like G2 273 Vigna Radiata MGTLGRAIYSVGFWIRETGQAIDRLGSRLQGGYFFQEQLSRHRTLMNIFDKAPVVDKDVFVAPSASVIGDVQVGRGSSIWYGCVLRGDVNSIRVGSGTNIQDNSLVHVAKSNLSGKVLPTVIGDNVTVGHSAVLHGCTVEDEAFVGMGAVLLDGVVVEKNAMVAAGALVRQNTRIPSGEVWAGNPAKFLRKLSNEEITFISQSAINYTNLAQVHAAENSKSYDEIEFEKVLRKKYARKDEEYDSMLGVVREIPPELILPDNVLPDKAEKALQK
gamma carbonic anhydrase-like 2, mitochondrial L2 256 Vigna Radiata MANLARFSKRALRSAHSLVRHAQSQVQPQLFAEERAFSTEAAKSITPSPDRVKWDYRGQRKIIPLGQWLPKVAVDAYVAPNVVLAGQVTVWDGASVWPGCVLRGDLNKISIGFCSNVQERSVLHAAWTSPTGLPADTSIERYVTIGAYSLLRSCTIEPECIIGQHSILMEGSLVETQSILEAGSVVPPGRRIPSGELWAGNPARFVRTLTHEEILEIPKLAVAINDLSRDHYSEFLPYSTVYLEVEKFKKSLGISV
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 A6 132 Vigna Radiata MASALRNVKVLPNSASVEEARQRVFDFFRATCRSLPSVMEIYNLYDVTSVAQLRSTVASEIRKNIGVSDPKVIDMLLFKGMEELMNVVNHSKQRHHIIGQYVVGQQGQVQDSASKDPAISPFLKNFYSSNYF
NDUA7 A7 127 Vigna Radiata MAKSASNSLVQTLKRYIKKPWEITGPCADPEYRSAVPLATEYRLQCPATTKEKPCIPNSLPETVYDIKYFSRDQRRNRPPIRRTVLKKADVEKLAKEQTFAVSDFPPVYLNSAVEEDINAIGGGYQG
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial isoform X1 A9 396 Vigna Radiata MQTIARRLGHQSLKSSTSIRAIYPISDHHYVADHQRYVSTIATKGVGHLVRKGTGGRSSVSGIIATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDCPRHLKLMGDLGQIVPMKYNPRDESSVKAVMAKANVVINLIGRDYETRNYSFEEVHYHMAENLAKISREHGGILRFIQVSCLGASPSSPSRMLRAKAAAEEVVLRELPEATILKPAVMIGTEDRILNPWAHFAKKYGFIPLFGNGSTKIQPVYVVDVAAALTTVLKDDGTSMGKTYELGGPEIFTVHDLAELMYETIREWPRYVKVPFPIAKALATPREILLNKVPFPLPTPEILNLDKIQALTTDTIVSENALTFNDLGIIPHKLKGYPVEFLISYRKGGPQFGSTISERVTPDAWP
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 AL 156 Vigna Radiata MASVVKNVLKSIREKGFGTFLRELKDEGYLRCLPDGNLLQTKIHNIGATLVGVDKFGNKYYEKLGDTQYGRHRWVEYAEKSRYNASQVPPEWHGWLHFITDHTGDELLLLKPKRYGVEHKENLSGEGEQYIYHSKGHALNPGQRDWTRYQPWESKA
NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial S1 746 Vigna Radiata MGFGLLASKALRPTSRLLLSSQNPTIFLRTIVSKPQLCNPEASAAQPAQPPPVDLPPRSPLAGARVHFANPDDAIEVFVDGYPVKIPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPVAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEVKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLLTSELSGNVIDICPVGALTSKPFAFKARNWELKGTETIDVTDAVGSNIRIDSRGPEVMRIVPRLNEDINEEWISDKTRFCYDGLKRQRLNDPMIRGPDGRFKAVNWRDALSVIADIAHQVKPEEIVGVAGKLSDAESMIALKDFLNRMGSNDVWGEGIGVNTNADFRSGYIMNTSIAGLEKADVFLLVGTQPRVEAAMVNARIRKTVRSNQAKVGYIGPATDFNYDHKHLGTDPQTLVEIAEGRHPFFKTLSDAKNPVIIVGAGVFERKDQDAIFAAVETIAQKANVVRPDWNGLNVLLLHAAQAAALDLGLVPQSEKSLESAKFVYLMGADDVNLDKIPDDAFVVYQGHHGDKSVYRANVILPTAAFSEKEGTYQNTEGCTQQTLPAVPTVGDSRDDWKIIRALSEVAGVRLPYDTIGAVRARIRNVAPNLVNVDEREPATLPSSLRPSFTQKVDTTPFGTVIENFYMTDAITRASKIMAQCSATLLKK
NDUS2 S2 394 Vigna Radiata MTTRNGQIKNFTSNFGPQHPAAHGVLRSVLEMNGEVVERAEPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSTMAQEHAYSLAVERLLNCEVPLRAQYIRVLFCEITRILNHLLALTTHAMDVGASTPSLWAFEEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMLTGNRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGPGVCWDLRRAAPYDVYDQLDFDVPVGTRGDCYDRYCIRIEEMRQSMRIIWQCPNKIPSGMIKADDRKLCPPSRCRMKLSMESSIHHFELYTEGFSVPAPSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVSGEVDR
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-06-01
Deposition Author(s): Guo, F. , Letts, J.A. , Maldonado, M. , Padavannil, A. , Zhou, L.