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FASTA Sequence PDB Format mmCIF Format
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6WAZ

+1 extended hiv-1 reverse transcriptase initiation complex core (pre-translocation state)

PDB DOI: 10.2210/pdb6waz/pdb

Classification: VIRAL PROTEIN/RNA
Organism(s): Human Immunodeficiency Virus 1 , Synthetic Construct

Deposited: 2020-03-26
Deposition Author(s): Jackson, L.N. , Kappel, K. , Larsen, K.P. , Puglisi, E.V. , Zhang, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.1 Å

Literature

+1 extended hiv-1 reverse transcriptase initiation complex core (pre-translocation state)

Jackson, L.N. , Kappel, K. , Larsen, K.P. , Puglisi, E.V. , Zhang, J.

Primary Citation of Related Structures: 6WAZ


Proteins
Molecule Chains Sequence Length Organism Sequence
Reverse transcriptase/ribonuclease H A 562 Human Immunodeficiency Virus 1 , Synthetic Construct MVPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDICKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTQLQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKIL
Reverse transcriptase p51 subunit B 442 Human Immunodeficiency Virus 1 , Synthetic Construct MVPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETF

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
HIV-1 viral RNA genome fragment c 101 NA GACUCUGGUAACUAGAGAUCCCUCAGACCCUUUUAGUCAGUGUGGAAAAUCUCUAGCAGUGGCGCCCGAACAGGGACUUGAAAGCGAAAGUAAAGCCAGAG
tRNA lysine 3 d 77 NA GCCCGGAUAGCUCAGUCGGUAGAGCAUCAGACUUUUAAUCUGAGGGUCCAGGGUUCAAGUCCCUGUUCGGGCGCCAC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-03-26
Deposition Author(s): Jackson, L.N. , Kappel, K. , Larsen, K.P. , Puglisi, E.V. , Zhang, J.