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6W03

Crystal structure of hiv-1 bg505 ds-sosip.3mut prefusion env trimer in complex with human antibodies 3h109l and 35o22 at 3.3 angstrom

PDB DOI: 10.2210/pdb6w03/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1

Deposited: 2020-02-28
Deposition Author(s): Kwong, P.D. , Lai, Y.-T.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.4 Å

Literature

Crystal structure of hiv-1 bg505 ds-sosip.3mut prefusion env trimer in complex with human antibodies 3h109l and 35o22 at 3.3 angstrom

Kwong, P.D. , Lai, Y.-T.

Primary Citation of Related Structures: 6W03


Proteins
Molecule Chains Sequence Length Organism Sequence
Envelope glycoprotein gp41 B 153 Homo Sapiens , Human Immunodeficiency Virus 1 AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
35O22 scFv heavy chain D 134 Homo Sapiens , Human Immunodeficiency Virus 1 QGQLVQSGATTTKPGSSVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVNMTTDTEVPVTSFTSTGAAYMEIRNLTSDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSSAST
35O22 scFv light chain E 114 Homo Sapiens , Human Immunodeficiency Virus 1 SQSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQS
Envelope glycoprotein gp160 G 481 Homo Sapiens , Human Immunodeficiency Virus 1 AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNAITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNMTRKSIRIGPGQAFYALGDIIGDIRQPHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
3H109L Fab heavy chain H 244 Homo Sapiens , Human Immunodeficiency Virus 1 QVQLQESGPGLVKPSETLSLTCTVSGGSISNYYWSWIRQSPGKGLEWIGYISDSESTNYNPSLKSRVIISVDTSKNQLSLKLNSVTAADSAIYYCARAQQGKRIYGMVSFGEFFYYYYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ
3H109L Fab light chain L 217 Homo Sapiens , Human Immunodeficiency Virus 1 SVTSYVRPLSVALGETASISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPMQWKMHKSYSCQVTHEGSTVEKTVAPTECS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2020-02-28
Deposition Author(s): Kwong, P.D. , Lai, Y.-T.