6VBV
Structure of the bovine bbsome:arl6:gtp complex
PDB DOI: 10.2210/pdb6vbv/pdb
Classification: PROTEIN TRANSPORT Organism(s): Bos Taurus
Deposited: 2019-12-19 Deposition Author(s): Brown, A. , Gui, M. , Koh, F. , Singh, S.K. , Yip, M.C.J.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.5 Å
Structure of the bovine bbsome:arl6:gtp complex
Brown, A. , Gui, M. , Koh, F. , Singh, S.K. , Yip, M.C.J.
Primary Citation of Related Structures: 6VBV
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Bardet-Biedl syndrome 18 protein | 0 | 69 | Bos Taurus | MAETKSMFREVLPKQGQLYVEDITTMVLCKPKLLPLKSLTLEKLEKMQQAAQDTIHQQEMTEKEQKITH |
| BBS1 domain-containing protein | 1 | 592 | Bos Taurus | MAATSSSDSDGGKGESEANSKWLDSLSDSMANIHTFSACLALADFHGDGEYKLAMGDLGPDGRQPRLKVLKGHTLVSQKPLPDLPAAAVTFLMASHEPRTPALAIASGPCVYVYKNLKPYFKFSLPSLPTNPLEQDLWNQAKEDQIDPLTLKEMLEGIREKAEVPLSVQSLRFLPLELSEMEAFVNQHKSKSIRRQTVITTMTTLKKNLADEDAVSCLVLGTENKELLVLDPEAFTILAKMSLPSVPAFLEASGQFDVEFRLAAACRNGSIYILRRDSKRPKYCIELGAQPVGLVGVHKVLVVGSNQDSLHGFTYKGKRLWTVQMPAAILAMNLLEQHSRGLQAVMAALANEEVRIYHDKVLLNVIRTPEAVTSLCFGRYGREDNTLIMTTLGGGLIIKILKRTAVFAEGGGEAGPPPSQAIKLNVPRKTRLYVDQTLREREAGTAMHRTFQADLYLLRLRAARAYVQALESSLSPVSLTAREPLKLHAVVQGLGPTFKLTLHLQNTSTARPILGLVVCFLYNEVLYALPRAFFKVPLLVPGLNYPLETFVKSLSDKGISDIIKVLVLREGQSTPLLSAHINMPMSEGLAAD |
| Bardet-Biedl syndrome 2 protein homolog | 2 | 721 | Bos Taurus | MLQPVFTLKLRHKISPRMVAVGRYDGTHPCLAAATQAGKVFIHNPHSRSQHLGAPRVLQSPLESDVSLLNINQTVSCLTAGVLNPELGYDALLVGTQTNLLAYDVYNNSDLFYREVADGASAIVLGTLGDITSPLAIIGGNCALQGFNHEGNDLFWTVTGDNVHSLALCDFDGDGKKELLVGSEDFDIRVFKEDEIVAEMSETEIITSLCPMYGSRFGYALSNGTVGVYDKTARYWRIKSKNQAMSIHAFDLNSDGVCELITGWSNGKVDARSDRTGEVIFKDNFSSAIAGVVEGDYRMEGCQQLICCSVDGEIRGYLPGTAEMRGNLMDISVEQDLIRELSQKKQNLLLELRNYEENAKAELSSPLNEADGHRGVIPANTKHHTALSVSLGSEAQAAHAELCISTSNDTIIRAVLIFAEGVFAGESHVVHPSVHHLSSSVRIPITPPKDIPVDLHLKTFVGYRSSTQFHVFELTRQLPRFSMYALTSPDPASEPLSYVNFIIAERAQRVVMWLNQNFLLPEDTNIQNAPFQVCFTSLRNGGQLYIKIKLSGEITVNTDDIDLAGDIIQSMASFFAIEDLQVEADFPVYFEELRKVLVKVDEYHSVHQKLSADMADNSNLIRSLLVQAEDARLMRDMKTMKNRYKELYDLNKDLLNGYKIRCNNHTELLGSLKAVNQAIQRAGHLRVGKPKNQVITACRDAIRSNNINMLFRIMRVGTASS |
| Bardet-Biedl syndrome 4 protein homolog | 4 | 519 | Bos Taurus | MAEEKLSARTQLPVSAESQKPVLKKAPEFPILEKQNWLIHLYYIQKDYEACKAVIKEQLQETHGLCEYAIYVQALIFRLEGNIQESLRLFQMCAFLSPQCADNLKQVARSLFLLGKHKAAIEVYNEAAKLNQKDWEICHNLGVCYIYLKQFDKAQDQLHNALHLNRHDLTYIMLGKIFLLKGDLDKAIEIYKKAVEFSPENTELLTTLGLLYLQLGIYQKAFEHLGNTLTYDPTNYKAILAAGSMMQTHGDFDVALTKYKVVACAVIESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPLDWKILYNLGLVHLTMQQYASAFHFLSAAINFQPKMGELYMLLAVALTNLEDSENAKRAYEEAVRLDKCNPLVNLNYAVLLYNQGEKRDALAQYQEMEKKVNLLKYSSSLEFDPEMVEVAQKLGAALQVGEALVWTKPVKDPKSKHQTASTSKAAGFQQPLGSNQALGQAMSSAATCRKLSSGAGGTSQLTKPPSLPLEPEPTVEAQPTEASAQTREK |
| Bardet-Biedl syndrome 5 protein homolog | 5 | 341 | Bos Taurus | MSVLDALWEDRDVRFDVSSQQMKTRPGEVLIDCLDSVEDTKGNNGDRGRLLVTNLRIVWHSLALPRVNLSIGYNCILNITTRTANSKLRGQTEALYVLTKCNSTRFEFIFTNLVPGSPRLYTSLIAVHRAYETSKMYRDFKLRSALIQNKQLRLLPQENVYNKINGVWNLSSDQGNLGTFFITNVRIVWHANMNDSFNVSIPYLQIRSVKIRDSKFGLALVIESSQQSGGYVLGFKIDPVEKLQESVKEINSLHKVYSANPIFGVDYEMEEKPQPLEALTVKQIQDDVEIDSDDHTDAFVAYFADGNKQQDREPVFSEELGLAIEKLKDGFTLQGLWEVMN |
| Bardet-Biedl syndrome 7 protein homolog | 7 | 715 | Bos Taurus | MDLNLNRADYLQVGVTSQKTMKLLPASKHRATQKVVVGDHDGIVMCFGMKKGEAVTVFKTLPGQKIARLELGGALNTPQEKIFIAAGSEIRGFTKRGKQFLSFETNLTESIKAMHISGSDLFLSASYIYNHYCDCKDQHYYLSGDKINDVICLPVERLLREVPVLACQDRVLRVLQGSDVTYEIEVPGPPTVLALHNGNGGDSGEDLLFGTSDGKLGLIQITTSKPIHKWEIRNEKKRGGILCVDSFDIVGDGVKDLLVGRDDGMVEVYGFDNANEPVLRFDHTLSESVTSIQGGCVGKDGYDEIVVSTYSGWITGLTTEPVHKESGPGEELKFNQEMQNKISSLRSELEQLQYKVLQEREKYQQSSQSSKAKSAVPSFSVNDKFTLNKDDASYSLILEVQTAIDNVLIQSDVPIDLLDVDKNSAVVSFSSCDSESNDNFLLATYRCQANTTRLELKIRSIEGQYGTLQAYVTPRIQPKTCQVRQYHIKPLSLHQRTHFIDHDRPMNTLTLTGQFSFSELHSWVVFCMPEVPEKPPAGECVTFYFQNTFLDTQLESTYRKGEGVFKSDNISTISILKDVLSKEATKRKINLNISYEINEVSVKHTLKLIHPKLEYQLLLAKKVQLIDALKELQVHEGNTNFLIPEYRCILEEADHLQEEYKKQPAHLERLYGMITDLFIDKFKFKGTNVKTKVPLLLEILDSYDQNALIAFFDAA |
| Tetratricopeptide repeat domain 8 | 8 | 501 | Bos Taurus | MEPLLLAWSYFRRRRFQLCADLCTQMLEKSPCDQAAWILKARALTEMVYVDEIDVDEEGIAEMILDENAIAQVPRPGTSLKLPGTNQTGGPSPAVRPVTQAGRPITGFLRPSTQSGRPGTIEQAIKTPRTAYTARPIASSSGRFVRLGTASMLTSPDGPFINLSRLNLAKYAQKPKLAKALFEYIFHHENDVKTALDLAALSTEHSQYKDWWWKVQIGKCYYRLGLYREAEKQFKSALKQQEMVDTFLYLAKVYISLDQPLTALNLFKQGLDKFPGEVTLLCGIARIYEEMNNISSATEYYKEVLKQDNTHVEAIACIGSNHFYTDQPEVALRFYRRLLQMGVYNCQLFNNLGLCCFYAQQYDMTLTSFERALSLAENEEEVADVWYNLGHVAVGTGDTNLAHQCFRLALVSNNQHAEAYNNLAVLEMRRGHVEQAKALLQTASSLAPHMYEPHFNFATISDKIGDLQRSYAAAKKSEAAFPDHVDTQHLIKQLEQHFAML |
| Bardet-Biedl syndrome 9 | 9 | 887 | Bos Taurus | MSLFKARDWWSTVLGDKEEFDQGCLCLADVDNTGNGQDKIIVGSFMGYLRIFNPHPVKTGDGAQAEDLLLEVHLRDPILQVEVGKFVSGTEMLHLAVLHSRKLCVYSVSGTLGNVEHGNQYQIKLMYEHNLQRTACNMTYGSFGGVKGRDLICIQSVDGMLMVFEQESYAFGRFLPGSLLPGPLAYSSRTDSFITVSSCHQVESYKYQVLAFATDADKRQETEQQKHGSGKRLVVDWTLNIGEQAIDICIVSFIQSASSVFVLGERNFFCLKDNGQIQFMKKLDYSPSCFLPYCSVSEGTINTLIGNHNNMLHIYQDVTLKWATQLPHVPVAVRVGCLHDLKGVIVTLSDDGHLQCSYLGTDPSLFQAPKVESRELNYDELDMELKELQKVIKNVNKSQDVWPLTEREDDLKVSAMVSPNFDSVSQATDVEVGADLVPSVTVKVTLKNRVALQKIKLSIYVQPPLVLTGDQFTFEFMAPEMTRTVGFSVYLKGSYSPPELEGNAVVSYSRPTERNPDGIPRVSQCKFRLPLKLVCLPGQPSKTASHKLTIDTNKSPVSLLSLFPGFAKQSEDDQVNVMGFRFLGGSQVTLLASKTSQRYRIQSEQFEDLWLITNELIIRLQEYFEKQGIKDFTCSFSGSVPLEEYFELIDHHFELRINGEKLEELLSERAVQFRAIQRRLLTRFKDKTPAPLQHLDTLLDGTYKQVIALADAVEENQDNLFQSFTRLKSATHLVILLIGLWQKLSADQIAILEAAFLPLQQDTQELGWEETVDAALSHLLKTCLSKSSKEQALNLNSQLGIPKDTSQLKKHITLFCDRLAKGGRLCLSTDAAAPQTMVMPGGCATIPESDLEGRSIDQDSSELFTNHKHLMVETPVPEVSPLQGVTE |
| ADP-ribosylation factor-like protein 6 | 3 | 186 | Bos Taurus | MGLLDRLSGLLGLKKKEVHVLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIQKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDKLRMVVAKEELRTLLNHPDIKHRRIPILFFANKMDLRDALTSVKVSQLLCLEDIKDKPWHICASDAIKGEGLQEGVDWLQDQIQSVKT |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2019-12-19 Deposition Author(s): Brown, A. , Gui, M. , Koh, F. , Singh, S.K. , Yip, M.C.J.