Human cd1d presenting alpha-galactosylceramide in complex with vhh nanobody 1d22
PDB DOI: 10.2210/pdb6v7z/pdb
Classification: IMMUNE SYSTEM Organism(s): Homo Sapiens , Lama Glama
Deposited: 2019-12-10 Deposition Author(s): Rossjohn, J. , Shahine, A.
Method: X-RAY DIFFRACTION Resolution: 2.75 Å
Human cd1d presenting alpha-galactosylceramide in complex with vhh nanobody 1d22
Primary Citation of Related Structures: 6V7Z
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Antigen-presenting glycoprotein CD1d | A | 347 | Homo Sapiens , Lama Glama | MQRLFPLRCLQISSFANSSWTRTDGLAWLGELQTHSWSNDSDTVRSLKPWSQGTFSDQQWETLQHIFRVYRSSFTRDVKEFAKMLRLSYPLELQVSAGCEVHPGNASNNFFHVAFQGKDILSFQGTSWEPTQEAPLWVNLAIQVLNQDKWTRETVQWLLNGTCPQFVSGLLESGKSELKKQVKPKAWLSRGPSPGPGRLLLVCHVSGFYPKPVWVKWMRGEQEQQGTQPGDILPNADETWYLRATLDVVAGEAAGLSCRVKHSSLEGQDIVLYWGSLVPRGSGSRIARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVMNHGSGLNDIFEAQKIEWHEHHHHHH |
| Antigen-presenting glycoprotein CD1d | C | 347 | Homo Sapiens , Lama Glama | MQRLFPLRCLQISSFANSSWTRTDGLAWLGELQTHSWSNDSDTVRSLKPWSQGTFSDQQWETLQHIFRVYRSSFTRDVKEFAKMLRLSYPLELQVSAGCEVHPGNASNNFFHVAFQGKDILSFQGTSWEPTQEAPLWVNLAIQVLNQDKWTRETVQWLLNGTCPQFVSGLLESGKSELKKQVKPKAWLSRGPSPGPGRLLLVCHVSGFYPKPVWVKWMRGEQEQQGTQPGDILPNADETWYLRATLDVVAGEAAGLSCRVKHSSLEGQDIVLYWGSLVPRGSGSRIARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVMNHGSGLNDIFEAQKIEWHEHHHHHH |
| Beta-2-microglobulin | B | 100 | Homo Sapiens , Lama Glama | MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| Beta-2-microglobulin | D | 100 | Homo Sapiens , Lama Glama | MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| Nanobody VHH ID22 | E | 118 | Homo Sapiens , Lama Glama | QVQLVESGGGLVQAGGSLRLSCAASGSIFSINAMGWYRQAPGKQRDFLAVISSSGSTNYADSVKGRFTISRDNAKNTAYLQMNSLKVEDTAVYYCAAHVAGFDEYNYWGQGTQVTVSS |
| Nanobody VHH ID22 | F | 118 | Homo Sapiens , Lama Glama | QVQLVESGGGLVQAGGSLRLSCAASGSIFSINAMGWYRQAPGKQRDFLAVISSSGSTNYADSVKGRFTISRDNAKNTAYLQMNSLKVEDTAVYYCAAHVAGFDEYNYWGQGTQVTVSS |
Method: X-RAY DIFFRACTION
Deposited Date: 2019-12-10 Deposition Author(s): Rossjohn, J. , Shahine, A.