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FASTA Sequence PDB Format mmCIF Format
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6V7Z

Human cd1d presenting alpha-galactosylceramide in complex with vhh nanobody 1d22

PDB DOI: 10.2210/pdb6v7z/pdb

Classification: IMMUNE SYSTEM
Organism(s): Salmonella Enterica , Klebsiella Phage Phiko2

Deposited: 2019-12-10
Deposition Author(s): Rossjohn, J. , Shahine, A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.75 Å

Literature

Human cd1d presenting alpha-galactosylceramide in complex with vhh nanobody 1d22

Rossjohn, J. , Shahine, A.

Primary Citation of Related Structures: 6V7Z


Proteins
Molecule Chains Sequence Length Organism Sequence
Antigen-presenting glycoprotein CD1d A 347 Salmonella Enterica , Klebsiella Phage Phiko2 MQRLFPLRCLQISSFANSSWTRTDGLAWLGELQTHSWSNDSDTVRSLKPWSQGTFSDQQWETLQHIFRVYRSSFTRDVKEFAKMLRLSYPLELQVSAGCEVHPGNASNNFFHVAFQGKDILSFQGTSWEPTQEAPLWVNLAIQVLNQDKWTRETVQWLLNGTCPQFVSGLLESGKSELKKQVKPKAWLSRGPSPGPGRLLLVCHVSGFYPKPVWVKWMRGEQEQQGTQPGDILPNADETWYLRATLDVVAGEAAGLSCRVKHSSLEGQDIVLYWGSLVPRGSGSRIARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVMNHGSGLNDIFEAQKIEWHEHHHHHH
Antigen-presenting glycoprotein CD1d C 347 Salmonella Enterica , Klebsiella Phage Phiko2 MQRLFPLRCLQISSFANSSWTRTDGLAWLGELQTHSWSNDSDTVRSLKPWSQGTFSDQQWETLQHIFRVYRSSFTRDVKEFAKMLRLSYPLELQVSAGCEVHPGNASNNFFHVAFQGKDILSFQGTSWEPTQEAPLWVNLAIQVLNQDKWTRETVQWLLNGTCPQFVSGLLESGKSELKKQVKPKAWLSRGPSPGPGRLLLVCHVSGFYPKPVWVKWMRGEQEQQGTQPGDILPNADETWYLRATLDVVAGEAAGLSCRVKHSSLEGQDIVLYWGSLVPRGSGSRIARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVMNHGSGLNDIFEAQKIEWHEHHHHHH
Beta-2-microglobulin B 100 Salmonella Enterica , Klebsiella Phage Phiko2 MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
Beta-2-microglobulin D 100 Salmonella Enterica , Klebsiella Phage Phiko2 MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
Nanobody VHH ID22 E 118 Salmonella Enterica , Klebsiella Phage Phiko2 QVQLVESGGGLVQAGGSLRLSCAASGSIFSINAMGWYRQAPGKQRDFLAVISSSGSTNYADSVKGRFTISRDNAKNTAYLQMNSLKVEDTAVYYCAAHVAGFDEYNYWGQGTQVTVSS
Nanobody VHH ID22 F 118 Salmonella Enterica , Klebsiella Phage Phiko2 QVQLVESGGGLVQAGGSLRLSCAASGSIFSINAMGWYRQAPGKQRDFLAVISSSGSTNYADSVKGRFTISRDNAKNTAYLQMNSLKVEDTAVYYCAAHVAGFDEYNYWGQGTQVTVSS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-12-10
Deposition Author(s): Rossjohn, J. , Shahine, A.