PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6TOA

Neck of empty gta particle computed with c6 symmetry

PDB DOI: 10.2210/pdb6toa/pdb

Classification: VIRUS
Organism(s): Rhodobacter Capsulatus De442

Deposited: 2019-12-11
Deposition Author(s): Bardy, P. , Beatty, J.T. , Fuzik, T. , Hrebik, D. , Pantucek, R. , Plevka, P.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.47 Å

Literature

Neck of empty gta particle computed with c6 symmetry

Bardy, P. , Beatty, J.T. , Fuzik, T. , Hrebik, D. , Pantucek, R. , Plevka, P.

Primary Citation of Related Structures: 6TOA


Proteins
Molecule Chains Sequence Length Organism Sequence
Adaptor protein Rcc01688 C 197 Rhodobacter Capsulatus De442 MMLNEVTAVPGTALPVAEFRDHLRLGTGFADLGAEDAALLSYLRAAIAAIEGRTAKALISRGFRLALTAWRWGDMQTLPIAPVATVTALRLVDAAGVETPVAAGWRLVPDMARPRIEALGAMLPMIPTGGRVEIDFTAGFGASWSALPVDLAQAVFLLAAQYYELRHDGAAEGGAMPFGVMALIERWRTVRVLGGRP
Adaptor protein Rcc01688 D 197 Rhodobacter Capsulatus De442 MMLNEVTAVPGTALPVAEFRDHLRLGTGFADLGAEDAALLSYLRAAIAAIEGRTAKALISRGFRLALTAWRWGDMQTLPIAPVATVTALRLVDAAGVETPVAAGWRLVPDMARPRIEALGAMLPMIPTGGRVEIDFTAGFGASWSALPVDLAQAVFLLAAQYYELRHDGAAEGGAMPFGVMALIERWRTVRVLGGRP
Portal protein Rcc01684 A 396 Rhodobacter Capsulatus De442 MGLNFFRKAAPEVRTEPVAERKASVTGRIVAMASGAGRPVWGPRDTVSLMRTGFAGNPVGFRSVKLIAEATAAVPLICQDAERRYEIHPVLDLLRRPNAGQGRAELFEALIGQILLSGNGYLEAVCPEPGVPRELHVLRSDRMAVVPGADGWPVGYDYTVGGRKHRFDMTGHPDPICHIKSFHPTDDHYGLSPMQAAAVALDVHNAASAWSKALLDNAARPSGAIIYKGADGQGVLAPEQYERLIFEMETHHQGARNAGRPMLLEGGLDWKPMGFSPSDMEFHETKAAAAREIALAFGVPPMLIGIPGDATYANYAEANRAFYRLTVLPLLTRVSAALAWWLSGYLGAQIELKPDLDQVPALAVERDQLWARIGAAGFLSNSEKRVLLGLPPTAEG
Portal protein Rcc01684 B 396 Rhodobacter Capsulatus De442 MGLNFFRKAAPEVRTEPVAERKASVTGRIVAMASGAGRPVWGPRDTVSLMRTGFAGNPVGFRSVKLIAEATAAVPLICQDAERRYEIHPVLDLLRRPNAGQGRAELFEALIGQILLSGNGYLEAVCPEPGVPRELHVLRSDRMAVVPGADGWPVGYDYTVGGRKHRFDMTGHPDPICHIKSFHPTDDHYGLSPMQAAAVALDVHNAASAWSKALLDNAARPSGAIIYKGADGQGVLAPEQYERLIFEMETHHQGARNAGRPMLLEGGLDWKPMGFSPSDMEFHETKAAAAREIALAFGVPPMLIGIPGDATYANYAEANRAFYRLTVLPLLTRVSAALAWWLSGYLGAQIELKPDLDQVPALAVERDQLWARIGAAGFLSNSEKRVLLGLPPTAEG
Tail terminator protein Rcc01690 F 135 Rhodobacter Capsulatus De442 MSYAVAGALQAAVYQQLRADAVLAALVGTAVYDAVPPGPLAGTYVSLGPEDVADASDKTGAGAVHDFVISVITDAAGFATAKAAAAAVSDALVGADLVLSRGRLVGLWFLRAKARRVEKADMRRIDLVFRARVEG
Stopper protein Rcc01689 E 112 Rhodobacter Capsulatus De442 MSRPRLNRLLVLEEAVRVADGAGGHRLDWQAKGEVWAEVTAGSGSERAGEFVTLASVPFTIVVRAAPVGAARRPRPEQRFREGARIFRILAVAERDREGHYLSCFAREEVVA
Tail tube protein Rcc01691 G 137 Rhodobacter Capsulatus De442 MAAQNGKDLLIKLDLTGSGQFETIAGLRATRISFNAETVDVTSLESQGGWRELLGGAGVRSASISGAGVFKDADTDERARQIFFDGEVPEFQVIIPDFGIVQGPFMITSIDYAGSHNGEASYELAMASAGALSFTAI
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-12-11
Deposition Author(s): Bardy, P. , Beatty, J.T. , Fuzik, T. , Hrebik, D. , Pantucek, R. , Plevka, P.