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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6RWL

Sivrcm intasome

PDB DOI: 10.2210/pdb6rwl/pdb

Classification: RECOMBINATION
Organism(s): Simian Immunodeficiency Virus

Deposited: 2019-06-05
Deposition Author(s): Cherepanov, P. , Cook, N. , Nans, A.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.36 Å

6rwl
Literature

Sivrcm intasome

Cherepanov, P. , Cook, N. , Nans, A.

Primary Citation of Related Structures: 6RWL


Proteins
Molecule Chains Sequence Length Organism Sequence
Pol protein A 290 Simian Immunodeficiency Virus GFLDGIEKAQEEHEKYHNNWRAMAEDFQIPQVVAKEIVAQCPKCQVKGEAMHGQVDASPKTWQMDCTHLEGKVIIVAVHVASGYIEAEVLPAETGKETAHFLLKLAARWPVKHLHTDNGDNFTSSAVQAVCWWAQIEHTFGVPYNPQSQGVVESMNHQLKTIITQIRDQAEKIETAVQMAVLIHNFKRKGGIGGYSAGERIIDIIASDLQTTKLQNQISKIQNFRVYFREGRDQQWKGPATLIWKGEGAVVIQDGQDLKVVPRRKCKIIKDYGRKDVDSETSMEGRQEKD
Pol protein B 290 Simian Immunodeficiency Virus GFLDGIEKAQEEHEKYHNNWRAMAEDFQIPQVVAKEIVAQCPKCQVKGEAMHGQVDASPKTWQMDCTHLEGKVIIVAVHVASGYIEAEVLPAETGKETAHFLLKLAARWPVKHLHTDNGDNFTSSAVQAVCWWAQIEHTFGVPYNPQSQGVVESMNHQLKTIITQIRDQAEKIETAVQMAVLIHNFKRKGGIGGYSAGERIIDIIASDLQTTKLQNQISKIQNFRVYFREGRDQQWKGPATLIWKGEGAVVIQDGQDLKVVPRRKCKIIKDYGRKDVDSETSMEGRQEKD
Pol protein C 290 Simian Immunodeficiency Virus GFLDGIEKAQEEHEKYHNNWRAMAEDFQIPQVVAKEIVAQCPKCQVKGEAMHGQVDASPKTWQMDCTHLEGKVIIVAVHVASGYIEAEVLPAETGKETAHFLLKLAARWPVKHLHTDNGDNFTSSAVQAVCWWAQIEHTFGVPYNPQSQGVVESMNHQLKTIITQIRDQAEKIETAVQMAVLIHNFKRKGGIGGYSAGERIIDIIASDLQTTKLQNQISKIQNFRVYFREGRDQQWKGPATLIWKGEGAVVIQDGQDLKVVPRRKCKIIKDYGRKDVDSETSMEGRQEKD
Pol protein M 290 Simian Immunodeficiency Virus GFLDGIEKAQEEHEKYHNNWRAMAEDFQIPQVVAKEIVAQCPKCQVKGEAMHGQVDASPKTWQMDCTHLEGKVIIVAVHVASGYIEAEVLPAETGKETAHFLLKLAARWPVKHLHTDNGDNFTSSAVQAVCWWAQIEHTFGVPYNPQSQGVVESMNHQLKTIITQIRDQAEKIETAVQMAVLIHNFKRKGGIGGYSAGERIIDIIASDLQTTKLQNQISKIQNFRVYFREGRDQQWKGPATLIWKGEGAVVIQDGQDLKVVPRRKCKIIKDYGRKDVDSETSMEGRQEKD
Pol protein I 290 Simian Immunodeficiency Virus GFLDGIEKAQEEHEKYHNNWRAMAEDFQIPQVVAKEIVAQCPKCQVKGEAMHGQVDASPKTWQMDCTHLEGKVIIVAVHVASGYIEAEVLPAETGKETAHFLLKLAARWPVKHLHTDNGDNFTSSAVQAVCWWAQIEHTFGVPYNPQSQGVVESMNHQLKTIITQIRDQAEKIETAVQMAVLIHNFKRKGGIGGYSAGERIIDIIASDLQTTKLQNQISKIQNFRVYFREGRDQQWKGPATLIWKGEGAVVIQDGQDLKVVPRRKCKIIKDYGRKDVDSETSMEGRQEKD
Pol protein J 290 Simian Immunodeficiency Virus GFLDGIEKAQEEHEKYHNNWRAMAEDFQIPQVVAKEIVAQCPKCQVKGEAMHGQVDASPKTWQMDCTHLEGKVIIVAVHVASGYIEAEVLPAETGKETAHFLLKLAARWPVKHLHTDNGDNFTSSAVQAVCWWAQIEHTFGVPYNPQSQGVVESMNHQLKTIITQIRDQAEKIETAVQMAVLIHNFKRKGGIGGYSAGERIIDIIASDLQTTKLQNQISKIQNFRVYFREGRDQQWKGPATLIWKGEGAVVIQDGQDLKVVPRRKCKIIKDYGRKDVDSETSMEGRQEKD
Pol protein K 290 Simian Immunodeficiency Virus GFLDGIEKAQEEHEKYHNNWRAMAEDFQIPQVVAKEIVAQCPKCQVKGEAMHGQVDASPKTWQMDCTHLEGKVIIVAVHVASGYIEAEVLPAETGKETAHFLLKLAARWPVKHLHTDNGDNFTSSAVQAVCWWAQIEHTFGVPYNPQSQGVVESMNHQLKTIITQIRDQAEKIETAVQMAVLIHNFKRKGGIGGYSAGERIIDIIASDLQTTKLQNQISKIQNFRVYFREGRDQQWKGPATLIWKGEGAVVIQDGQDLKVVPRRKCKIIKDYGRKDVDSETSMEGRQEKD
Pol protein E 290 Simian Immunodeficiency Virus GFLDGIEKAQEEHEKYHNNWRAMAEDFQIPQVVAKEIVAQCPKCQVKGEAMHGQVDASPKTWQMDCTHLEGKVIIVAVHVASGYIEAEVLPAETGKETAHFLLKLAARWPVKHLHTDNGDNFTSSAVQAVCWWAQIEHTFGVPYNPQSQGVVESMNHQLKTIITQIRDQAEKIETAVQMAVLIHNFKRKGGIGGYSAGERIIDIIASDLQTTKLQNQISKIQNFRVYFREGRDQQWKGPATLIWKGEGAVVIQDGQDLKVVPRRKCKIIKDYGRKDVDSETSMEGRQEKD
Pol protein D 289 Simian Immunodeficiency Virus FLDGIEKAQEEHEKYHNNWRAMAEDFQIPQVVAKEIVAQCPKCQVKGEAMHGQVDASPKTWQMDCTHLEGKVIIVAVHVASGYIEAEVLPAETGKETAHFLLKLAARWPVKHLHTDNGDNFTSSAVQAVCWWAQIEHTFGVPYNPQSQGVVESMNHQLKTIITQIRDQAEKIETAVQMAVLIHNFKRKGGIGGYSAGERIIDIIASDLQTTKLQNQISKIQNFRVYFREGRDQQWKGPATLIWKGEGAVVIQDGQDLKVVPRRKCKIIKDYGRKDVDSETSMEGRQEKD
Pol protein L 289 Simian Immunodeficiency Virus FLDGIEKAQEEHEKYHNNWRAMAEDFQIPQVVAKEIVAQCPKCQVKGEAMHGQVDASPKTWQMDCTHLEGKVIIVAVHVASGYIEAEVLPAETGKETAHFLLKLAARWPVKHLHTDNGDNFTSSAVQAVCWWAQIEHTFGVPYNPQSQGVVESMNHQLKTIITQIRDQAEKIETAVQMAVLIHNFKRKGGIGGYSAGERIIDIIASDLQTTKLQNQISKIQNFRVYFREGRDQQWKGPATLIWKGEGAVVIQDGQDLKVVPRRKCKIIKDYGRKDVDSETSMEGRQEKD
Pol protein F 290 Simian Immunodeficiency Virus GFLDGIEKAQEEHEKYHNNWRAMAEDFQIPQVVAKEIVAQCPKCQVKGEAMHGQVDASPKTWQMDCTHLEGKVIIVAVHVASGYIEAEVLPAETGKETAHFLLKLAARWPVKHLHTDNGANFTSSAVQAVCWWAQIEHTFGVPYNPQSQGVVESMNHQLKTIITQIRDQAEKIETAVQMAVLIHNFKRKGGIGGYSAGERIIDIIASDLQTTKLQNQISKIQNFRVYFREGRDQQWKGPATLIWKGEGAVVIQDGQDLKVVPRRKCKIIKDYGRKDVDSETSMEGRQEKD
Pol protein N 290 Simian Immunodeficiency Virus GFLDGIEKAQEEHEKYHNNWRAMAEDFQIPQVVAKEIVAQCPKCQVKGEAMHGQVDASPKTWQMDCTHLEGKVIIVAVHVASGYIEAEVLPAETGKETAHFLLKLAARWPVKHLHTDNGANFTSSAVQAVCWWAQIEHTFGVPYNPQSQGVVESMNHQLKTIITQIRDQAEKIETAVQMAVLIHNFKRKGGIGGYSAGERIIDIIASDLQTTKLQNQISKIQNFRVYFREGRDQQWKGPATLIWKGEGAVVIQDGQDLKVVPRRKCKIIKDYGRKDVDSETSMEGRQEKD

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*GP*CP*TP*AP*AP*GP*AP*AP*AP*AP*AP*TP*CP*TP*CP*TP*AP*CP*CP*A)-3') t 30 NA GTTCTAGAAGGCTAAGAAAAATCTCTACCA
DNA (5'-D(P*GP*CP*TP*AP*AP*GP*AP*AP*AP*AP*AP*TP*CP*TP*CP*TP*AP*CP*CP*A)-3') w 30 NA GTTCTAGAAGGCTAAGAAAAATCTCTACCA
DNA (5'-D(*AP*AP*CP*TP*GP*GP*TP*AP*GP*AP*GP*AP*TP*TP*TP*TP*TP*CP*TP*TP*AP*GP*C)-3') s 33 NA AACTGGTAGAGATTTTTCTTAGCCTTCTAGAAC
DNA (5'-D(*AP*AP*CP*TP*GP*GP*TP*AP*GP*AP*GP*AP*TP*TP*TP*TP*TP*CP*TP*TP*AP*GP*C)-3') q 33 NA AACTGGTAGAGATTTTTCTTAGCCTTCTAGAAC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-06-05
Deposition Author(s): Cherepanov, P. , Cook, N. , Nans, A.