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6RT5

The yth domain of ythdc1 protein in complex with gm6ac oligonucleotide

PDB DOI: 10.2210/pdb6rt5/pdb

Classification: RNA BINDING PROTEIN
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2019-05-22
Deposition Author(s): Bedi, R. , Caflisch, A. , Sledz, P.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.303 Å

6rt5
Literature

The yth domain of ythdc1 protein in complex with gm6ac oligonucleotide

Bedi, R. , Caflisch, A. , Sledz, P.

Primary Citation of Related Structures: 6RT5


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(*(6MZ)P*C)-3') a 3 NA GAC
RNA (5'-R(*(6MZ)P*C)-3') e 3 NA GAC

Proteins
Molecule Chains Sequence Length Organism Sequence
YTH domain-containing protein 1 B 166 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQVIHKMRH
YTH domain-containing protein 1 C 166 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQVIHKMRH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-05-22
Deposition Author(s): Bedi, R. , Caflisch, A. , Sledz, P.