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6R24

The structure of a ty3 retrotransposon icosahedral capsid

PDB DOI: 10.2210/pdb6r24/pdb

Classification: VIRUS LIKE PARTICLE
Organism(s): Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C)

Deposited: 2019-03-15
Deposition Author(s): Bilanchone, V. , Briggs, J.A.G. , Dodonova, S.O. , Prinz, S. , Sandmeyer, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 7.5 Å

6r24
Literature

The structure of a ty3 retrotransposon icosahedral capsid

Bilanchone, V. , Briggs, J.A.G. , Dodonova, S.O. , Prinz, S. , Sandmeyer, S.

Primary Citation of Related Structures: 6R24


Proteins
Molecule Chains Sequence Length Organism Sequence
Transposon Ty3-I Gag-Pol polyprotein A 309 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) MSFMDQIPGGGNYPKLPVECLPNFPIQPSLTFRGRNDSHKLKNFISEIMLNMSMISWPNDASRIVYCRRHLLNPAAQWANDFVQEQGILEITFDTFIQGLYQHFYKPPDINKIFNAITQLSEAKLGIERLNQRFRKIWDRMPPDFMTEKAAIMTYTRLLTKETYNIVRMHKPETLKDAMEEAYQTTALTERFFPGFELDADGDTIIGATTHLQEEYDSDYDSEDNLTQNRYVHTVRTRRSYNKPMSNHRNRRNNNASREECIKNRLCFYCKKEGHRLNECRARKAVLTDLELESKDQQTLFIKTLPIVH
Transposon Ty3-I Gag-Pol polyprotein B 309 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) MSFMDQIPGGGNYPKLPVECLPNFPIQPSLTFRGRNDSHKLKNFISEIMLNMSMISWPNDASRIVYCRRHLLNPAAQWANDFVQEQGILEITFDTFIQGLYQHFYKPPDINKIFNAITQLSEAKLGIERLNQRFRKIWDRMPPDFMTEKAAIMTYTRLLTKETYNIVRMHKPETLKDAMEEAYQTTALTERFFPGFELDADGDTIIGATTHLQEEYDSDYDSEDNLTQNRYVHTVRTRRSYNKPMSNHRNRRNNNASREECIKNRLCFYCKKEGHRLNECRARKAVLTDLELESKDQQTLFIKTLPIVH
Transposon Ty3-I Gag-Pol polyprotein C 309 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) MSFMDQIPGGGNYPKLPVECLPNFPIQPSLTFRGRNDSHKLKNFISEIMLNMSMISWPNDASRIVYCRRHLLNPAAQWANDFVQEQGILEITFDTFIQGLYQHFYKPPDINKIFNAITQLSEAKLGIERLNQRFRKIWDRMPPDFMTEKAAIMTYTRLLTKETYNIVRMHKPETLKDAMEEAYQTTALTERFFPGFELDADGDTIIGATTHLQEEYDSDYDSEDNLTQNRYVHTVRTRRSYNKPMSNHRNRRNNNASREECIKNRLCFYCKKEGHRLNECRARKAVLTDLELESKDQQTLFIKTLPIVH
Transposon Ty3-I Gag-Pol polyprotein D 309 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) MSFMDQIPGGGNYPKLPVECLPNFPIQPSLTFRGRNDSHKLKNFISEIMLNMSMISWPNDASRIVYCRRHLLNPAAQWANDFVQEQGILEITFDTFIQGLYQHFYKPPDINKIFNAITQLSEAKLGIERLNQRFRKIWDRMPPDFMTEKAAIMTYTRLLTKETYNIVRMHKPETLKDAMEEAYQTTALTERFFPGFELDADGDTIIGATTHLQEEYDSDYDSEDNLTQNRYVHTVRTRRSYNKPMSNHRNRRNNNASREECIKNRLCFYCKKEGHRLNECRARKAVLTDLELESKDQQTLFIKTLPIVH
Transposon Ty3-I Gag-Pol polyprotein E 309 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) MSFMDQIPGGGNYPKLPVECLPNFPIQPSLTFRGRNDSHKLKNFISEIMLNMSMISWPNDASRIVYCRRHLLNPAAQWANDFVQEQGILEITFDTFIQGLYQHFYKPPDINKIFNAITQLSEAKLGIERLNQRFRKIWDRMPPDFMTEKAAIMTYTRLLTKETYNIVRMHKPETLKDAMEEAYQTTALTERFFPGFELDADGDTIIGATTHLQEEYDSDYDSEDNLTQNRYVHTVRTRRSYNKPMSNHRNRRNNNASREECIKNRLCFYCKKEGHRLNECRARKAVLTDLELESKDQQTLFIKTLPIVH
Transposon Ty3-I Gag-Pol polyprotein F 309 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) MSFMDQIPGGGNYPKLPVECLPNFPIQPSLTFRGRNDSHKLKNFISEIMLNMSMISWPNDASRIVYCRRHLLNPAAQWANDFVQEQGILEITFDTFIQGLYQHFYKPPDINKIFNAITQLSEAKLGIERLNQRFRKIWDRMPPDFMTEKAAIMTYTRLLTKETYNIVRMHKPETLKDAMEEAYQTTALTERFFPGFELDADGDTIIGATTHLQEEYDSDYDSEDNLTQNRYVHTVRTRRSYNKPMSNHRNRRNNNASREECIKNRLCFYCKKEGHRLNECRARKAVLTDLELESKDQQTLFIKTLPIVH
Transposon Ty3-I Gag-Pol polyprotein G 309 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) MSFMDQIPGGGNYPKLPVECLPNFPIQPSLTFRGRNDSHKLKNFISEIMLNMSMISWPNDASRIVYCRRHLLNPAAQWANDFVQEQGILEITFDTFIQGLYQHFYKPPDINKIFNAITQLSEAKLGIERLNQRFRKIWDRMPPDFMTEKAAIMTYTRLLTKETYNIVRMHKPETLKDAMEEAYQTTALTERFFPGFELDADGDTIIGATTHLQEEYDSDYDSEDNLTQNRYVHTVRTRRSYNKPMSNHRNRRNNNASREECIKNRLCFYCKKEGHRLNECRARKAVLTDLELESKDQQTLFIKTLPIVH
Transposon Ty3-I Gag-Pol polyprotein H 309 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) MSFMDQIPGGGNYPKLPVECLPNFPIQPSLTFRGRNDSHKLKNFISEIMLNMSMISWPNDASRIVYCRRHLLNPAAQWANDFVQEQGILEITFDTFIQGLYQHFYKPPDINKIFNAITQLSEAKLGIERLNQRFRKIWDRMPPDFMTEKAAIMTYTRLLTKETYNIVRMHKPETLKDAMEEAYQTTALTERFFPGFELDADGDTIIGATTHLQEEYDSDYDSEDNLTQNRYVHTVRTRRSYNKPMSNHRNRRNNNASREECIKNRLCFYCKKEGHRLNECRARKAVLTDLELESKDQQTLFIKTLPIVH
Transposon Ty3-I Gag-Pol polyprotein I 309 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) MSFMDQIPGGGNYPKLPVECLPNFPIQPSLTFRGRNDSHKLKNFISEIMLNMSMISWPNDASRIVYCRRHLLNPAAQWANDFVQEQGILEITFDTFIQGLYQHFYKPPDINKIFNAITQLSEAKLGIERLNQRFRKIWDRMPPDFMTEKAAIMTYTRLLTKETYNIVRMHKPETLKDAMEEAYQTTALTERFFPGFELDADGDTIIGATTHLQEEYDSDYDSEDNLTQNRYVHTVRTRRSYNKPMSNHRNRRNNNASREECIKNRLCFYCKKEGHRLNECRARKAVLTDLELESKDQQTLFIKTLPIVH
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-03-15
Deposition Author(s): Bilanchone, V. , Briggs, J.A.G. , Dodonova, S.O. , Prinz, S. , Sandmeyer, S.