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6PKA

Structure of clpp from staphylococcus aureus in complex with ureadepsipeptide

PDB DOI: 10.2210/pdb6pka/pdb

Classification: HYDROLASE/ANTIBIOTIC
Organism(s): Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct

Deposited: 2019-06-28
Deposition Author(s): Griffith, E.C. , Lee, R.E.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.25 Å

6pka
Literature

Structure of clpp from staphylococcus aureus in complex with ureadepsipeptide

Griffith, E.C. , Lee, R.E.

Primary Citation of Related Structures: 6PKA


Proteins
Molecule Chains Sequence Length Organism Sequence
OO1-WFP-SER-PRO-YCP-ALA-MP8 ureadepsipeptide A 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
OO1-WFP-SER-PRO-YCP-ALA-MP8 ureadepsipeptide B 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
OO1-WFP-SER-PRO-YCP-ALA-MP8 ureadepsipeptide C 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
ATP-dependent Clp protease proteolytic subunit D 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit E 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit F 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit G 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit I 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit K 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit L 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit M 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit N 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit S 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
ATP-dependent Clp protease proteolytic subunit T 203 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKLEHHHHHH
OO1-WFP-SER-PRO-YCP-ALA-MP8 ureadepsipeptide H 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
OO1-WFP-SER-PRO-YCP-ALA-MP8 ureadepsipeptide J 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
OO1-WFP-SER-PRO-YCP-ALA-MP8 ureadepsipeptide O 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
OO1-WFP-SER-PRO-YCP-ALA-MP8 ureadepsipeptide P 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
OO1-WFP-SER-PRO-YCP-ALA-MP8 ureadepsipeptide Q 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
OO1-WFP-SER-PRO-YCP-ALA-MP8 ureadepsipeptide R 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
OO1-WFP-SER-PRO-YCP-ALA-MP8 ureadepsipeptide U 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
OO1-WFP-SER-PRO-YCP-ALA-MP8 ureadepsipeptide V 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
OO1-WFP-SER-PRO-YCP-ALA-MP8 ureadepsipeptide X 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
OO1-WFP-SER-PRO-YCP-ALA-MP8 ureadepsipeptide Y 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
OO1-WFP-SER-PRO-YCP-ALA-MP8 ureadepsipeptide Z 7 Staphylococcus Aureus (Strain Nctc 8325) , Synthetic Construct XXSPXAP
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-06-28
Deposition Author(s): Griffith, E.C. , Lee, R.E.