6PGK
Membrane protein megahertz crystallography at the european xfel, photosystem i xfel at 2.9 a
PDB DOI: 10.2210/pdb6pgk/pdb
Classification: PHOTOSYNTHESIS Organism(s): Thermosynechococcus Elongatus (Strain Bp-1)
Deposited: 2019-06-24 Deposition Author(s): Fromme, P. , Fromme, R. , Gisriel, C.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.9 Å
Membrane protein megahertz crystallography at the european xfel, photosystem i xfel at 2.9 a
Fromme, P. , Fromme, R. , Gisriel, C.
Primary Citation of Related Structures: 6PGK
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Photosystem I iron-sulfur center | A | 81 | Thermosynechococcus Elongatus (Strain Bp-1) | MAHTVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASSPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLAY |
| Photosystem I reaction center subunit PsaK | G | 83 | Thermosynechococcus Elongatus (Strain Bp-1) | MVLATLPDTTWTPSVGLVVILCNLFAIALGRYAIQSRGKGPGLPIALPALFEGFGLPELLATTSFGHLLAAGVVSGLQYAGAL |
| Photosystem I P700 chlorophyll a apoprotein A1 | Y | 755 | Thermosynechococcus Elongatus (Strain Bp-1) | MTISPPEREPKVRVVVDNDPVPTSFEKWAKPGHFDRTLARGPQTTTWIWNLHALAHDFDTHTSDLEDISRKIFSAHFGHLAVVFIWLSGMYFHGAKFSNYEAWLADPTGIKPSAQVVWPIVGQGILNGDVGGGFHGIQITSGLFQLWRASGITNEFQLYCTAIGGLVMAGLMLFAGWFHYHKRAPKLEWFQNVESMLNHHLAGLLGLGSLAWAGHQIHVSLPINKLLDAGVAAKDIPLPHEFILNPSLMAELYPKVDWGFFSGVIPFFTFNWAAYSDFLTFNGGLNPVTGGLWLSDTAHHHLAIAVLFIIAGHMYRTNWGIGHSLKEILEAHKGPFTGAGHKGLYEVLTTSWHAQLAINLAMMGSLSIIVAQHMYAMPPYPYLATDYPTQLSLFTHHMWIGGFLVVGGAAHGAIFMVRDYDPAMNQNNVLDRVLRHRDAIISHLNWVCIFLGFHSFGLYVHNDTMRAFGRPQDMFSDTGIQLQPVFAQWVQNLHTLAPGGTAPNAAATASVAFGGDVVAVGGKVAMMPIVLGTADFMVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSGWDHVFLGLFWMYNCISVVIFHFSWKMQSDVWGTVAPDGTVSHITGGNFAQSAITINGWLRDFLWAQASQVIGSYGSALSAYGLLFLGAHFIWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSIIQGRAVGVAHYLLGGIATTWAFFLARIISVG |
| Photosystem I reaction center subunit XI | L | 155 | Thermosynechococcus Elongatus (Strain Bp-1) | MAEELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILRGLEVGMAHGYFLIGPWVKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSSSDPLKTSEGWSQFTAGFFVGAMGSAFVAFFLLENFLVVDGIMTGLFN |
| Photosystem I reaction center subunit XI | U | 155 | Thermosynechococcus Elongatus (Strain Bp-1) | MAEELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILRGLEVGMAHGYFLIGPWVKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSSSDPLKTSEGWSQFTAGFFVGAMGSAFVAFFLLENFLVVDGIMTGLFN |
| Photosystem I P700 chlorophyll a apoprotein A2 | H | 741 | Thermosynechococcus Elongatus (Strain Bp-1) | MATKFPKFSQDLAQDPTTRRIWYAIAMAHDFESHDGMTEENLYQKIFASHFGHLAIIFLWVSGSLFHVAWQGNFEQWVQDPVNTRPIAHAIWDPQFGKAAVDAFTQAGASNPVDIAYSGVYHWWYTIGMRTNGDLYQGAIFLLILASLALFAGWLHLQPKFRPSLSWFKNAESRLNHHLAGLFGVSSLAWAGHLIHVAIPESRGQHVGWDNFLSTMPHPAGLAPFFTGNWGVYAQNPDTASHVFGTAQGAGTAILTFLGGFHPQTESLWLTDMAHHHLAIAVLFIVAGHMYRTQFGIGHSIKEMMDAKDFFGTKVEGPFNMPHQGIYETYNNSLHFQLGWHLACLGVITSLVAQHMYSLPPYAFIAQDHTTMAALYTHHQYIAGFLMVGAFAHGAIFLVRDYDPAQNKGNVLDRVLQHKEAIISHLSWVSLFLGFHTLGLYVHNDVVVAFGTPEKQILIEPVFAQFIQAAHGKLLYGFDTLLSNPDSIASTAWPNYGNVWLPGWLDAINSGTNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYAFPCDGPGRGGTCDISAWDAFYLAMFWMLNTIGWVTFYWHWKHLGVWEGNVAQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGTNNLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWKDKPVALSIVQARLVGLAHFSVGYILTYAAFLIASTAAKFG |
| Photosystem I reaction center subunit XII | M | 31 | Thermosynechococcus Elongatus (Strain Bp-1) | MALTDTQVYVALVIALLPAVLAFRLSTELYK |
| Photosystem I reaction center subunit XII | V | 31 | Thermosynechococcus Elongatus (Strain Bp-1) | MALTDTQVYVALVIALLPAVLAFRLSTELYK |
| Photosystem I reaction center subunit VIII | I | 38 | Thermosynechococcus Elongatus (Strain Bp-1) | MMGSYAASFLPWIFIPVVCWLMPTVVMGLLFLYIEGEA |
| Photosystem I 4.8K protein | W | 39 | Thermosynechococcus Elongatus (Strain Bp-1) | MSTMATKSAKPTYAFRTFWAVLLLAINFLVAAYYFGILK |
| Photosystem I 4.8K protein | X | 39 | Thermosynechococcus Elongatus (Strain Bp-1) | MSTMATKSAKPTYAFRTFWAVLLLAINFLVAAYYFGILK |
| Photosystem I reaction center subunit IX | J | 41 | Thermosynechococcus Elongatus (Strain Bp-1) | MKHFLTYLSTAPVLAAIWMTITAGILIEFNRFYPDLLFHPL |
| Photosystem I reaction center subunit II | B | 139 | Thermosynechococcus Elongatus (Strain Bp-1) | MTTLTGQPPLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLALAAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQLKFTGKKPYDP |
| Photosystem I P700 chlorophyll a apoprotein A2 | Z | 741 | Thermosynechococcus Elongatus (Strain Bp-1) | MATKFPKFSQDLAQDPTTRRIWYAIAMAHDFESHDGMTEENLYQKIFASHFGHLAIIFLWVSGSLFHVAWQGNFEQWVQDPVNTRPIAHAIWDPQFGKAAVDAFTQAGASNPVDIAYSGVYHWWYTIGMRTNGDLYQGAIFLLILASLALFAGWLHLQPKFRPSLSWFKNAESRLNHHLAGLFGVSSLAWAGHLIHVAIPESRGQHVGWDNFLSTMPHPAGLAPFFTGNWGVYAQNPDTASHVFGTAQGAGTAILTFLGGFHPQTESLWLTDMAHHHLAIAVLFIVAGHMYRTQFGIGHSIKEMMDAKDFFGTKVEGPFNMPHQGIYETYNNSLHFQLGWHLACLGVITSLVAQHMYSLPPYAFIAQDHTTMAALYTHHQYIAGFLMVGAFAHGAIFLVRDYDPAQNKGNVLDRVLQHKEAIISHLSWVSLFLGFHTLGLYVHNDVVVAFGTPEKQILIEPVFAQFIQAAHGKLLYGFDTLLSNPDSIASTAWPNYGNVWLPGWLDAINSGTNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYAFPCDGPGRGGTCDISAWDAFYLAMFWMLNTIGWVTFYWHWKHLGVWEGNVAQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGTNNLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWKDKPVALSIVQARLVGLAHFSVGYILTYAAFLIASTAAKFG |
| Photosystem I reaction center subunit IV | C | 76 | Thermosynechococcus Elongatus (Strain Bp-1) | MVQRGSKVKILRPESYWYNEVGTVASVDQTPGVKYPVIVRFDKVNYTGYSGSASGVNTNNFALHEVQEVAPPKKGK |
| Photosystem I iron-sulfur center | N | 81 | Thermosynechococcus Elongatus (Strain Bp-1) | MAHTVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASSPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLAY |
| Photosystem I reaction center subunit III | D | 164 | Thermosynechococcus Elongatus (Strain Bp-1) | MRRFLALLLVLTLWLGFTPLASADVAGLVPCKDSPAFQKRAAAAVNTTADPASGQKRFERYSQALCGEDGLPHLVVDGRLSRAGDFLIPSVLFLYIAGWIGWVGRAYLIAVRNSGEANEKEIIIDVPLAIKCMLTGFAWPLAALKELASGELTAKDNEITVSPR |
| Photosystem I reaction center subunit II | O | 139 | Thermosynechococcus Elongatus (Strain Bp-1) | MTTLTGQPPLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLALAAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQLKFTGKKPYDP |
| Photosystem I reaction center subunit VIII | E | 38 | Thermosynechococcus Elongatus (Strain Bp-1) | MMGSYAASFLPWIFIPVVCWLMPTVVMGLLFLYIEGEA |
| Photosystem I reaction center subunit IV | P | 76 | Thermosynechococcus Elongatus (Strain Bp-1) | MVQRGSKVKILRPESYWYNEVGTVASVDQTPGVKYPVIVRFDKVNYTGYSGSASGVNTNNFALHEVQEVAPPKKGK |
| Photosystem I reaction center subunit IX | F | 41 | Thermosynechococcus Elongatus (Strain Bp-1) | MKHFLTYLSTAPVLAAIWMTITAGILIEFNRFYPDLLFHPL |
| Photosystem I reaction center subunit III | Q | 164 | Thermosynechococcus Elongatus (Strain Bp-1) | MRRFLALLLVLTLWLGFTPLASADVAGLVPCKDSPAFQKRAAAAVNTTADPASGQKRFERYSQALCGEDGLPHLVVDGRLSRAGDFLIPSVLFLYIAGWIGWVGRAYLIAVRNSGEANEKEIIIDVPLAIKCMLTGFAWPLAALKELASGELTAKDNEITVSPR |
| Photosystem I reaction center subunit VIII | R | 38 | Thermosynechococcus Elongatus (Strain Bp-1) | MMGSYAASFLPWIFIPVVCWLMPTVVMGLLFLYIEGEA |
| Photosystem I reaction center subunit IX | S | 41 | Thermosynechococcus Elongatus (Strain Bp-1) | MKHFLTYLSTAPVLAAIWMTITAGILIEFNRFYPDLLFHPL |
| Photosystem I reaction center subunit PsaK | K | 83 | Thermosynechococcus Elongatus (Strain Bp-1) | MVLATLPDTTWTPSVGLVVILCNLFAIALGRYAIQSRGKGPGLPIALPALFEGFGLPELLATTSFGHLLAAGVVSGLQYAGAL |
| Photosystem I reaction center subunit PsaK | T | 83 | Thermosynechococcus Elongatus (Strain Bp-1) | MVLATLPDTTWTPSVGLVVILCNLFAIALGRYAIQSRGKGPGLPIALPALFEGFGLPELLATTSFGHLLAAGVVSGLQYAGAL |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2019-06-24 Deposition Author(s): Fromme, P. , Fromme, R. , Gisriel, C.