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FASTA Sequence PDB Format mmCIF Format
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6PCU

Vp8* of a g2p[4] human rotavirus in complex with scfv antibody 9

PDB DOI: 10.2210/pdb6pcu/pdb

Classification: viral protein/immune system
Organism(s): Homo Sapiens , Rotavirus A

Deposited: 2019-06-18
Deposition Author(s): Hu, L. , Venkataram Prasad, B.V.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.4 Å

6pcu
Literature

Vp8* of a g2p[4] human rotavirus in complex with scfv antibody 9

Hu, L. , Venkataram Prasad, B.V.

Primary Citation of Related Structures: 6PCU


Proteins
Molecule Chains Sequence Length Organism Sequence
Outer capsid protein VP4 A 162 Homo Sapiens , Rotavirus A GSILDGPYQPTTFKPPNDYWLLISSNTDGVVYESTNNSDFWTAVIAVEPHVSQTNRQYVLFGENKQFNVENSSDKWKFFEMFKGSSQSDFSNRRTLTSNNRLVGMLKYGGRVWTFHGETPRATTDSSNTADLNNISIIIHSEFYIIPRSQESKCNEYINNGL
Outer capsid protein VP4 D 162 Homo Sapiens , Rotavirus A GSILDGPYQPTTFKPPNDYWLLISSNTDGVVYESTNNSDFWTAVIAVEPHVSQTNRQYVLFGENKQFNVENSSDKWKFFEMFKGSSQSDFSNRRTLTSNNRLVGMLKYGGRVWTFHGETPRATTDSSNTADLNNISIIIHSEFYIIPRSQESKCNEYINNGL
Outer capsid protein VP4 G 162 Homo Sapiens , Rotavirus A GSILDGPYQPTTFKPPNDYWLLISSNTDGVVYESTNNSDFWTAVIAVEPHVSQTNRQYVLFGENKQFNVENSSDKWKFFEMFKGSSQSDFSNRRTLTSNNRLVGMLKYGGRVWTFHGETPRATTDSSNTADLNNISIIIHSEFYIIPRSQESKCNEYINNGL
Variable domain of antibody scFv9 B 252 Homo Sapiens , Rotavirus A GSQPVLTQPPSASASLGASVTLTCTLSSGYSNYKVDWYQQRPGKGPRFVMRVGTGGIVGSKGDGIADRFSVSGSGLNRSLTIKNIQEEDESDYHCGADHGSGDNFVRVFGGGTKLTVLGGGGSGGGGSGGGGSQVQLQESGPGLVKPSQTLSLTCSVSGVSLSGGSYTWNWIRQPAGKGLEWIGRIFTSGSTNYNPSLKGRLTMSIDTSKNQLSLRLSSVTAADTAVYYCVADYYYSVPDVWGQGTPVTVSS
Variable domain of antibody scFv9 E 252 Homo Sapiens , Rotavirus A GSQPVLTQPPSASASLGASVTLTCTLSSGYSNYKVDWYQQRPGKGPRFVMRVGTGGIVGSKGDGIADRFSVSGSGLNRSLTIKNIQEEDESDYHCGADHGSGDNFVRVFGGGTKLTVLGGGGSGGGGSGGGGSQVQLQESGPGLVKPSQTLSLTCSVSGVSLSGGSYTWNWIRQPAGKGLEWIGRIFTSGSTNYNPSLKGRLTMSIDTSKNQLSLRLSSVTAADTAVYYCVADYYYSVPDVWGQGTPVTVSS
Variable domain of antibody scFv9 H 252 Homo Sapiens , Rotavirus A GSQPVLTQPPSASASLGASVTLTCTLSSGYSNYKVDWYQQRPGKGPRFVMRVGTGGIVGSKGDGIADRFSVSGSGLNRSLTIKNIQEEDESDYHCGADHGSGDNFVRVFGGGTKLTVLGGGGSGGGGSGGGGSQVQLQESGPGLVKPSQTLSLTCSVSGVSLSGGSYTWNWIRQPAGKGLEWIGRIFTSGSTNYNPSLKGRLTMSIDTSKNQLSLRLSSVTAADTAVYYCVADYYYSVPDVWGQGTPVTVSS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-06-18
Deposition Author(s): Hu, L. , Venkataram Prasad, B.V.