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6OZ4

Crystal structure of broadly neutralizing antibody n49p6 fab in complex with hiv-1 bg505 sosip.664 env trimer ectodomain.

PDB DOI: 10.2210/pdb6oz4/pdb

Classification: IMMUNE SYSTEM
Organism(s): Salmonella Enterica , Anoxybacillus Sp. Lm18-11

Deposited: 2019-05-15
Deposition Author(s): Pazgier, M. , Tolbert, W.D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 4.05 Å

6oz4
Literature

Crystal structure of broadly neutralizing antibody n49p6 fab in complex with hiv-1 bg505 sosip.664 env trimer ectodomain.

Pazgier, M. , Tolbert, W.D.

Primary Citation of Related Structures: 6OZ4


Proteins
Molecule Chains Sequence Length Organism Sequence
Envelope glycoprotein gp160 G 481 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Envelope glycoprotein gp41 B 153 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
N49P6 antibody Fab heavy chain H 229 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 AGLMQSGAVMKNSGASVRVSCQADGYDFIDYVIHWFRQRRGEGLEWLGWMNPSGGGTNYPRPFQGKVTMTRDTSTETAYLDVRGLTYDDTAVYYCVRDRANGSGRRRFESVNWFLDLWGRGTQITVVSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
N49P6 antibody light chain L 205 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 QSALTQPRSVSASPGQSVTISCTGTHNYVSWCQQKPGQAPKLLIYDFNKRPSGVSDRFSGSTSGNTASLTISGLQADDEGHYFCWAFENIGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-05-15
Deposition Author(s): Pazgier, M. , Tolbert, W.D.