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FASTA Sequence PDB Format mmCIF Format
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6ORQ

Modified bg505 sosip-based immunogen rc1 in complex with the elicited v3-glycan patch antibody ab275mur

PDB DOI: 10.2210/pdb6orq/pdb

Classification: VIRAL PROTEIN/Immune System
Organism(s): Human Immunodeficiency Virus 1 , Mus Musculus

Deposited: 2019-04-30
Deposition Author(s): Abernathy, M.E. , Bjorkman, P.J. , Gristick, H.B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.4 Å

6orq
Literature

Modified bg505 sosip-based immunogen rc1 in complex with the elicited v3-glycan patch antibody ab275mur

Abernathy, M.E. , Bjorkman, P.J. , Gristick, H.B.

Primary Citation of Related Structures: 6ORQ


Proteins
Molecule Chains Sequence Length Organism Sequence
RC1 variant of HIV-1 Env glycoprotein gp41 A 148 Human Immunodeficiency Virus 1 , Mus Musculus AVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
RC1 variant of HIV-1 Env glycoprotein gp41 C 148 Human Immunodeficiency Virus 1 , Mus Musculus AVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
RC1 variant of HIV-1 Env glycoprotein gp41 F 148 Human Immunodeficiency Virus 1 , Mus Musculus AVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
RC1 variant of HIV-1 Env glycoprotein gp120 B 473 Human Immunodeficiency Virus 1 , Mus Musculus AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNYAPNLLSNMRGELKQCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTPVQINCTRPNNNTVKSIRIGPGQAFYYFGDIIGDIRMAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSIVLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRV
RC1 variant of HIV-1 Env glycoprotein gp120 G 473 Human Immunodeficiency Virus 1 , Mus Musculus AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNYAPNLLSNMRGELKQCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTPVQINCTRPNNNTVKSIRIGPGQAFYYFGDIIGDIRMAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSIVLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRV
RC1 variant of HIV-1 Env glycoprotein gp120 I 473 Human Immunodeficiency Virus 1 , Mus Musculus AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNYAPNLLSNMRGELKQCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTPVQINCTRPNNNTVKSIRIGPGQAFYYFGDIIGDIRMAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSIVLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRV
Ab275MUR antibody Fab heavy chain D 122 Human Immunodeficiency Virus 1 , Mus Musculus EVQLQESGGDLVKPGGSLKLSCAASGFTFSRYGMSWVRQTPDKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARHGITTVGVAMDYWGQGTYSHVSSA
Ab275MUR antibody Fab heavy chain H 122 Human Immunodeficiency Virus 1 , Mus Musculus EVQLQESGGDLVKPGGSLKLSCAASGFTFSRYGMSWVRQTPDKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARHGITTVGVAMDYWGQGTYSHVSSA
Ab275MUR antibody Fab heavy chain J 122 Human Immunodeficiency Virus 1 , Mus Musculus EVQLQESGGDLVKPGGSLKLSCAASGFTFSRYGMSWVRQTPDKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARHGITTVGVAMDYWGQGTYSHVSSA
Ab275MUR antibody Fab light chain E 218 Human Immunodeficiency Virus 1 , Mus Musculus DIVMTQSPASLAVSLGQRATISCKASQSVDYDGDSYMNWYQQKPGQPPKLLIYAASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSNEDPYTFGAGTKLELKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCXATHKTSTSPIVKSFNRNEC
Ab275MUR antibody Fab light chain K 218 Human Immunodeficiency Virus 1 , Mus Musculus DIVMTQSPASLAVSLGQRATISCKASQSVDYDGDSYMNWYQQKPGQPPKLLIYAASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSNEDPYTFGAGTKLELKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCXATHKTSTSPIVKSFNRNEC
Ab275MUR antibody Fab light chain L 218 Human Immunodeficiency Virus 1 , Mus Musculus DIVMTQSPASLAVSLGQRATISCKASQSVDYDGDSYMNWYQQKPGQPPKLLIYAASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSNEDPYTFGAGTKLELKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCXATHKTSTSPIVKSFNRNEC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-04-30
Deposition Author(s): Abernathy, M.E. , Bjorkman, P.J. , Gristick, H.B.