Crystal structure of the non-neutralizing and adcc-potent antibody c11 in complex with hiv-1 clade a/e gp120
PDB DOI: 10.2210/pdb6oej/pdb
Classification: IMMUNE SYSTEM Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1
Deposited: 2019-03-27 Deposition Author(s): Pazgier, M. , Tolbert, W.D.
Method: X-RAY DIFFRACTION Resolution: 3.45 Å
Crystal structure of the non-neutralizing and adcc-potent antibody c11 in complex with hiv-1 clade a/e gp120
Primary Citation of Related Structures: 6OEJ
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
clade A/E 93TH057 HIV-1 gp120 core | G | 385 | Homo Sapiens , Human Immunodeficiency Virus 1 | CDNLWVTVYYGVPVWKDADTTLFCASDAKAHETEVHNVWATHACVPTDPCPQEIHLENVTENFNMWKNNMVEQMQEDVISLWDQSLQPCVKLTGGSVIKQACPKISFDPIPIHYCTPAGYVILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSNGGSGSGGDIRKAYCEINGTKWNKVLKQVTEKLKEHFNNKTIIFQPPSGGDLEITMHSFNCRGEFFYCNTTQLFNNTCIGNETMKGCNGTITLPCKIKQIINMWQGTGQAMYAPPIDGKINCVSNITGILLTRDGGANNTSNETFRPGGGNIKDNWRSELYKYKVVQIEPLGIAPTKAKRRVVQREKR |
clade A/E 93TH057 HIV-1 gp120 core | A | 385 | Homo Sapiens , Human Immunodeficiency Virus 1 | CDNLWVTVYYGVPVWKDADTTLFCASDAKAHETEVHNVWATHACVPTDPCPQEIHLENVTENFNMWKNNMVEQMQEDVISLWDQSLQPCVKLTGGSVIKQACPKISFDPIPIHYCTPAGYVILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSNGGSGSGGDIRKAYCEINGTKWNKVLKQVTEKLKEHFNNKTIIFQPPSGGDLEITMHSFNCRGEFFYCNTTQLFNNTCIGNETMKGCNGTITLPCKIKQIINMWQGTGQAMYAPPIDGKINCVSNITGILLTRDGGANNTSNETFRPGGGNIKDNWRSELYKYKVVQIEPLGIAPTKAKRRVVQREKR |
C11 Fab heavy chain | H | 239 | Homo Sapiens , Human Immunodeficiency Virus 1 | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGRGLEWVSSISNTSTYIYYADSVEGRFTLSRDNAKNSLYLQMNSLRAEDTAVYYCARANQHFDWLLSLLGGYHYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHT |
C11 Fab heavy chain | B | 239 | Homo Sapiens , Human Immunodeficiency Virus 1 | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGRGLEWVSSISNTSTYIYYADSVEGRFTLSRDNAKNSLYLQMNSLRAEDTAVYYCARANQHFDWLLSLLGGYHYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHT |
C11 Fab light chain | L | 218 | Homo Sapiens , Human Immunodeficiency Virus 1 | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFIGSGSGTDFTLKISRVEAEDVGVFYCMQALQAVGFGPGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
C11 Fab light chain | C | 218 | Homo Sapiens , Human Immunodeficiency Virus 1 | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFIGSGSGTDFTLKISRVEAEDVGVFYCMQALQAVGFGPGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
Method: X-RAY DIFFRACTION
Deposited Date: 2019-03-27 Deposition Author(s): Pazgier, M. , Tolbert, W.D.