6NUH
Non-covalent dna-protein complex between e. coli yedk and ssdna containing an abasic site analog
PDB DOI: 10.2210/pdb6nuh/pdb
Classification: dna binding protein/dna Organism(s): Adineta Vaga , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2019-02-01 Deposition Author(s): Amidon, K.M. , Eichman, B.F.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.594 Å
Non-covalent dna-protein complex between e. coli yedk and ssdna containing an abasic site analog
Primary Citation of Related Structures: 6NUH
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| SOS response-associated peptidase YedK | A | 226 | Adineta Vaga , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | CGRFAQSQTREDYLALLAEDIERDIPYDPEPIGRYNVAPGTKVLLLSERDEHLHLDPVFWGYAPGWWDKPPLINARVETAATSRMFKPLWQHGRAICFADGWFEWKKEGDKKQPFFIYRADGQPIFMAAIGSTPFERGDEAEGFLIVTAAADQGLVDIHDRRPLVLSPEAAREWMRQEISGKEASEIAASGCVPANQFSWHPVSRAVGNVKNQGAELIQPVLEVLF |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*GP*TP*CP*(PDI)P*GP*GP*A)-3') | c | 7 | NA | GTCXGGA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2019-02-01 Deposition Author(s): Amidon, K.M. , Eichman, B.F.