6NJQ
Structure of tbp-hoogsteen containing dna complex
PDB DOI: 10.2210/pdb6njq/pdb
Classification: DNA BINDING PROTEIN/DNA Organism(s): Arabidopsis Thaliana , Synthetic Construct
Deposited: 2019-01-04 Deposition Author(s): Schumacher, M.A. , Stelling, A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.75 Å
Structure of tbp-hoogsteen containing dna complex
Schumacher, M.A. , Stelling, A.
Primary Citation of Related Structures: 6NJQ
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| TATA-box-binding protein 1 | B | 220 | Arabidopsis Thaliana , Synthetic Construct | MGSSHHHHHHSSGLVPRGSHMTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQQ |
| TATA-box-binding protein 1 | A | 220 | Arabidopsis Thaliana , Synthetic Construct | MGSSHHHHHHSSGLVPRGSHMTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQQ |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*CP*GP*GP*GP*CP*A)-3') | e | 14 | NA | GCTATAAACGGGCA |
| DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*CP*GP*GP*GP*CP*A)-3') | c | 14 | NA | GCTATAAACGGGCA |
| DNA (5'-D(*TP*GP*CP*CP*CP*GP*TP*TP*TP*AP*TP*AP*GP*C)-3') | f | 14 | NA | TGCCCGTTTATAGC |
| DNA (5'-D(*TP*GP*CP*CP*CP*GP*TP*TP*TP*AP*TP*AP*GP*C)-3') | d | 14 | NA | TGCCCGTTTATAGC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2019-01-04 Deposition Author(s): Schumacher, M.A. , Stelling, A.