6NBY
T.elongatus ndh (composite model)
PDB DOI: 10.2210/pdb6nby/pdb
Classification: OXIDOREDUCTASE Organism(s): Thermosynechococcus Elongatus Bp-1
Deposited: 2018-12-10 Deposition Author(s): Bayne, A. , Davies, K.M. , Laughlin, T.G. , Savage, D.F. , Trempe, J.-F.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.1 Å
T.elongatus ndh (composite model)
Bayne, A. , Davies, K.M. , Laughlin, T.G. , Savage, D.F. , Trempe, J.-F.
Primary Citation of Related Structures: 6NBY
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| NAD(P)H-quinone oxidoreductase subunit 1 | A | 372 | Thermosynechococcus Elongatus Bp-1 | MESGIDLQGQFISALQSLGLSHDLAKLLWLPLPMLMMLIVATVGVLVAVWLERKISAAVQQRIGPEYIGPLGILAPLADGLKLIFKEDVLPANSDRWLFTLGPAVVVIPVFLSYIIVPFGQNLLISNLAMGVFLWIALSSIAPIGLLMAGYASNNKYSLLGGLRAAAQSISYEIPLALAVLAVAMMSNGLGTVEIVEQQSQYGILSWNVWRQPIGFLVFWIAALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGAYVNLVLSALLVSVLYFGGWSFPIPLETIANLLGVSETNPFLQIAFAVLGITMTLIKAYFFVFLAILLRWTVPRVRIDQLLDLGWKFLLPVGLVNLLLTAGLKLAFPVAFGG |
| NAD(P)H-quinone oxidoreductase subunit J | J | 168 | Thermosynechococcus Elongatus Bp-1 | MSDTPEAPIVEAGPVGRLLQSQNLSVESLGRDASGVEMIKVDRDRLLAVCQTLYADGFNYLRCQAAYDSGPGQDLVSTYHLIKLSDNADRPPEVRIKVFVPRDDPRVPSVYWIWKTADWQERESYDMFGIVYEGHPNLKRILMPEDWVGWPLRKDYITPDFYELQEAY |
| NAD(P)H-quinone oxidoreductase subunit K | K | 237 | Thermosynechococcus Elongatus Bp-1 | MTNTTSPAILNPIARPEVPQELAENIILTSLNDVYDWARLSSLWPLMYGTACCFIEFAAMIGSRFDFDRFGLVPRNSPRQADLIITSGTITMKMAPALVRLYEQMPSPKYVIAMGACTITGGMFSSDSYSAVRGVDKLIPVDVYLPGCPPRPEAIMDAIVKLRKKIANEHINERGNLAQTHRLFTAKHKMKPVPPILTGQYLNAPSRQAPPPALAAAMGIAVPALGEAVSETTSVAE |
| NAD(P)H-quinone oxidoreductase subunit L | L | 76 | Thermosynechococcus Elongatus Bp-1 | MAVSTELLVLGVYGALAGLYLLVVPAIVYAYLNARWYVASSFERAFMYFLVTFFFPGLLLLAPFINFRPQPRSLNS |
| NAD(P)H-quinone oxidoreductase subunit M | M | 111 | Thermosynechococcus Elongatus Bp-1 | MLLKSTTRHVHIYAGHVVDGEVHPDTETLTLNVDPDNELEWNEAALAKVEAKFRELVANAAGEDLTEYNLRRIGSDLEHFIRSLLMQGEIGYNLNSRVRNYSLGIPRVNHS |
| NAD(P)H-quinone oxidoreductase subunit N | N | 150 | Thermosynechococcus Elongatus Bp-1 | MGLLAGYQFVKDLESAGALALFVPPEGGFEGRYQRRLRSKGYTTLPMSAPGLGDLAAYLTQEHGIRPAHTGKEDIRVYFQPPLVTYHLENLPPNAKGLVLWLIDGKRLSKQEFAYLAQLTQTLPKFKVVVEVGGDRVVRWEPLADWVAAA |
| NAD(P)H-quinone oxidoreductase subunit O | O | 70 | Thermosynechococcus Elongatus Bp-1 | MAIKKGDLVKVVAEKLANSLEALASDHRYPPYLFEGRGEVVDIRGDYAQIKFPVPTPTVWLRLDQLEVAQ |
| Proton-translocating NADH-quinone dehydrogenase subunit P NdhP | P | 44 | Thermosynechococcus Elongatus Bp-1 | MDAVISVKPILLAMTPVFILLCLFFGTRNGFYDTDQYHGNGSAH |
| Proton-translocating NADH-quinone dehydrogenase subunit Q NdhQ | Q | 45 | Thermosynechococcus Elongatus Bp-1 | MATDFNRGIMKFDGADSPAMIAISAVLILGFIAGLIWWALHTAYA |
| Tlr0636 protein | S | 110 | Thermosynechococcus Elongatus Bp-1 | MIRPIADTYPLLPLSKAQMGQRQEIINSHKRLWDKTMATDLIMTILPGMTVKVTNPNDTYYQFQGIVQRITDGKVAVLFEGGNWDKLVTFQASELEPVVVTPKEKAKAKK |
| NAD(P)H-quinone oxidoreductase subunit 2 | B | 515 | Thermosynechococcus Elongatus Bp-1 | MDLVTLAGQLNAGTILPETILIVTLLVVLLADLIQGRQADRWTPYFAIVGLGGAIATMIPLWTQPATISFFGSFISDHLSLFFRGLIALSALGTILMSIRYVEQTGSSLGEFMTILLTATVGGMFIAGAQELVFIFVALETLSIASYLLTGYTKRDSRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGHTQLPAIAQALSSESLGLVVALVFVIAGISFKISAVPFHQWTPDVYEGAPTPVVAFLSVGSKAAGFALAIRFLTLAFPSVTDQWQLIFTVLAILSMILGNVVALAQTSMKRMLAYSSIGQAGFVMIGFVVGTEAGYASMLFYLLVYLFMNLGAFTCVILFSLRTGTDQISEYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGAYGLVLLGLLTSVISIYYYIRVVKMMVVKEPQEMSEAVRNYPEVSWSSFGLRPLQVGLVMTVIATSLAGILANPLFNLVNTAVWDVPQLANQPTVMEVAYQALSPAGKS |
| NAD(P)H-quinone oxidoreductase subunit 3 | C | 132 | Thermosynechococcus Elongatus Bp-1 | MVAIPRLRDTATVFVLSGYEYFLGFLIICSLVPVLALAASALLRPKSGRMIRLTTYESGMEPIGGAWIQFNVRYYMFALVFVIFDVETVFLYPWAVAFHQLGLLAFIEALIFIAILVVALVYAWRKRALEWS |
| NAD(P)H-quinone oxidoreductase chain 4 1 | D | 529 | Thermosynechococcus Elongatus Bp-1 | MSTFPWLTTIILFPIVAALAIPFIPDPTGKGRPIRWYALAVGLIDFALIVYAFTNFYDLNTPGMQLWESYDWIPEIGLRWSVGADGLSMPLILLTGFITTLAILAAWPVTLKPRLFYFLMLAMYGGQIAVFAVQDMLVFFLAWELELIPVYLLLAIWGGHKRQYAATKFILYTAGSSLFILVAGLAMAFYGDTVSFDMQTLAAKDYALGFQLLVYAGFLVAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALIRMNVDMLPAAHAKFAPVLVILGVVNIIYAALTSYAQRNLKRKIAYSSISHIGFVLIGIASFTNLGMSGAVLQMVSHGLIGASLFFLVGATYDRTHTLILEEMGGVGQKMKKIFAMFTACSLASLALPGMSGFVAELMVFIGFATSDAYSLPFRVIVVFLAAVGVILTPIYLLSMLREIFYGPENKELVEHEALVDAEPREVFIIACLLVPIIGIGLYPKLLTQIYDATTGQVIARAREVLPTLAQQTEQPLGILPMVAPQLKANAQ |
| NAD(P)H-quinone oxidoreductase subunit 4L | E | 101 | Thermosynechococcus Elongatus Bp-1 | MQLTYVLILAALLFCIGIYGLVTSRNAVRVLMSIELLLNAVNLNLIGFANYLDGQQIKGQVFAVFVITVAAAEAAVGLAIILAIYRNRDTVDMEKFNLLKW |
| NADH dehydrogenase subunit 5 | F | 656 | Thermosynechococcus Elongatus Bp-1 | MEPLYQYAWLIPVLPLLGALIVGFGLIAFSETTSKLRRPSAIFIMALMAIAMGHSLTLFWSQVQGHLPYTQMIEWAAAGNLHIAMGYVIDPLAALMLVIVTTVAFLVMLYSDGYMAHDPGYVRFFAYLSLFGSSMLGLVVSPNLVQVYIFWELVGMCSYLLIGFWYDRKSAAEAAQKAFVTNRVGDFGLLLGMVGLFWATGTFDFAGMGDRLTELVNTGLLSPSLAAILAILVFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLIARMFPVFEQLPQVMTTIAWTGAFTAFMGATIAITQNDIKKSLAYSTISQLGYMVMGMGVGAYSAGLFHLMTHAYFKAMLFLGSGSVIHSMEGVVGHNPDLAQDMRYMGGLRKYMPITGATFLVGCLAISGVPPFAGFWSKDEILGAVFHANPAMWLLTWLTAGLTAFYMFRMYFMTFEGKFRNVPPERQEHHDHHSHHAAVPHESPWTMTLPLVVLAIPSTLIGFVGTPFNNLFEVFIHAPGEEKVAEHAVDLTEFLILGGSSVGIGLMGITVAYLMYLKGTPSPQAIAKAIQPLYQFSLHKWYFDELYEAVFIKGCRRLARQVLEVDYNVVDGVVNLTGFVTMVTGEGLKYLQNGRAQFYALIVLLAVLGFVIFSVQT |
| NADH-quinone oxidoreductase subunit J | G | 200 | Thermosynechococcus Elongatus Bp-1 | MDLATLTQTITFFALAAAVIIAALGVVLLDNVVYSAFLLGGVFLSIAGLYILMNADFVSAAQILIYVGAVNVLILFAIMLVNKRETYTPVPGRWLRQGGAAVVSLGVFALLTKMILQTPWQLSSVPPTPDSITTIGQHFFSDFLLPFELASVLLLMALIGAVVLARRELVLEPEPILGEEVVPPLELPERPREPVALSEK |
| NAD(P)H-quinone oxidoreductase subunit H | H | 394 | Thermosynechococcus Elongatus Bp-1 | MPKIETRTEPMVINMGPHHPSMHGVLRLMVTLDGEDVIDCEPVIGYLHRGMEKIAENRTNIMFIPYVSRWDYAAGMFNEAVTVNAPEKLAGIPVPKRASYIRVIMLELNRIANHLLWLGPFLADVGAQTPFFYIFREREYIYDLFEAATGMRFINNNYFRIGGVAADLTYGWVTKCRDFCDYFLPKVDEYERLITNNPIFVRRLQGVGKISREEAINWGLSGPMLRASGVKWDLRKVDHYECYDDFDWDVPVATEGDCLARYIVRIQEMRESVKIIRQALDGLPGGPYENLEAKRMLEGAKSEWNGFDYQYIGKKLSPTFKIPKGEHYVRVESGKGELGIYLIGDDNVFPWRWKIRPPDFNNLQVLPQLLKGMKVADIVAILGSIDVIMGSVDR |
| NAD(P)H-quinone oxidoreductase subunit I | I | 196 | Thermosynechococcus Elongatus Bp-1 | MKFLNQITNYAKEAVQSAKYIGQGLSVTFDHMRRRPITVQYPYEKLIPSERFRGRIHFEFDKCIACEVCVRVCPINLPVVDWVFNKELKKKELKHYSIDFGVCIFCANCVEYCPTNCLSVTEEYELATYDRHELNYDSVAMGRIPYKVTQDPMVTPIREFAYLPAGVMSGHDLPAGAQRAGERPEAIANTAKSSEN |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2018-12-10 Deposition Author(s): Bayne, A. , Davies, K.M. , Laughlin, T.G. , Savage, D.F. , Trempe, J.-F.