Crystal structure of hiv-1 b41 sosip.664 prefusion env trimer in complex with human antibodies 3h109l and 35o22 at 3.4 angstrom
PDB DOI: 10.2210/pdb6muf/pdb
Classification: IMMUNE SYSTEM/INHIBITOR Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1
Deposited: 2018-10-23 Deposition Author(s): Kwong, P.D. , Lai, Y.-T.
Crystal structure of hiv-1 b41 sosip.664 prefusion env trimer in complex with human antibodies 3h109l and 35o22 at 3.4 angstrom
Primary Citation of Related Structures: 6MUF
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Envelope glycoprotein gp160 | B | 153 | Homo Sapiens , Human Immunodeficiency Virus 1 | AVGLGAFILGFLGAAGSTMGAASMALTVQARLLLSGIVQQQNNLLRAPEAQQHMLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKIICCTNVPWNDSWSNKTINEIWDNMTWMQWEKEIDNYTQHIYTLLEVSQIQQEKNEQELLELD |
35O22 scFv heavy chain portion | D | 134 | Homo Sapiens , Human Immunodeficiency Virus 1 | QGQLVQSGATTTKPGSSVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLTSDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSSAST |
35O22 scFv light chain portion | E | 114 | Homo Sapiens , Human Immunodeficiency Virus 1 | SQSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQS |
Envelope glycoprotein gp160 | G | 489 | Homo Sapiens , Human Immunodeficiency Virus 1 | AAKKWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEIVLGNVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCNNVNTNNTNNSTNATISDWEKMETGEMKNCSFNVTTSIRDKIKKEYALFYKLDVVPLENKNNINNTNITNYRLINCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNSKTFNGSGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENITDNAKTIIVQLNEAVEINCTRPNNNTRKSIHIGPGRAFYATGDIIGNIRQAHCNISKARWNETLGQIVAKLEEQFPNKTIIFNHSSGGDPEIVTHSFNCGGEFFYCNTTPLFNSTWNNTRTDDYPTGGEQNITLQCRIKQIINMWQGVGKAMYAPPIRGQIRCSSNITGLLLTRDGGRDQNGTETFRPGGGNMRDNWRSELYKYKVVKIEPLGIAPTACKRRVVQRRRRRR |
3H109L Fab heavy chain | H | 244 | Homo Sapiens , Human Immunodeficiency Virus 1 | QVQLQESGPGLVKPSETLSLTCTVSGGSISNYYWSWIRQSPGKGLEWIGYISDSESTNYNPSLKSRVIISVDTSKNQLSLKLNSVTAADSAIYYCARAQQGKRIYGMVSFGEFFYYYYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ |
3H109L Fab light chain | L | 217 | Homo Sapiens , Human Immunodeficiency Virus 1 | SVTSYVRPLSVALGETASISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPMQWKMHKSYSCQVTHEGSTVEKTVAPTECS |
Method: X-RAY DIFFRACTION
Deposited Date: 2018-10-23 Deposition Author(s): Kwong, P.D. , Lai, Y.-T.