6KV5
Structure of influenza d virus apo polymerase
PDB DOI: 10.2210/pdb6kv5/pdb
Classification: VIRAL PROTEIN Organism(s): Influenza D Virus (D/Swine/Oklahoma/1334/2011)
Deposited: 2019-09-03 Deposition Author(s): Gao, G.F. , Peng, Q. , Peng, R. , Qi, J. , Shi, Y.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 4.6 Å
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Polymerase 3 | A | 710 | Influenza D Virus (D/Swine/Oklahoma/1334/2011) | MSSVIREIAKRFLEQATINIAEEVVREYGDHERTMISVGVHFQACCLISDEYTLEDETTPRYVLLEGLKRQEAISKQNNICSTLGLEPLRNLADIFDRKTRRFLEVGITKRESDEYYQEKFNKIGNDMDIHVFTYEGKYFSNNPNGLEDIQKTRIFTFLSFVSDELRKENMFTEMYVTEEGAPELEMYKSKLFIAMRDESVPLPYINYEHLRTRCETFKRNQAECEAKVADVASRLKIKLEHLEENKLRPLEIPKEKEAPYTHKFLMKDAWFFAKPHDSERAQPQQILYDFFEAANMGFMTTSPKPIFGKQGLMYHSLWGQTKRAIKDKRNELEPSEQRDFLCGIGRASKKIQEDKWQESREEEFKQEETKGAAKRGFPTWFNEEWLWAMRDSGDGDNKIGDWIPMAEMPPCKNEMEDYAKKMCEELESKIQGTNCAREMSKLIHTIGSLHTECRNFPGKVKIVPIYCRGTLRGESTDCLFGIAIKGKSHLNKDDGMYTVVTFEFSTEEPNPSKHEKYTVFEAGTVPVEAVVLTPKRERVLKEKKLFLYCRTTGMSKLKNDWFSKCRRCLIPTMETVEQIVLKECALKEENRVSEMLENKRAWIAHENGENLTRLVSTKLKDLCRMLIVTQFYYCIYNDNQLEGFCNEQKKFLMFLQADKDSKSAFTFNQKGLYEKIEECIVSNPLCIFLADRLNKLFLVAKSNGAKYFE |
| RNA-directed RNA polymerase catalytic subunit | B | 753 | Influenza D Virus (D/Swine/Oklahoma/1334/2011) | MEINPYLLMLNNDITSMISLTYPYTGAPPMSHGTSTKYSMETVSRTYSYSRTKKEVPSGIFPIERRKFCNTIEDKENLEKPNGNVDINFMLSLAEMLEEKMGKGFFKFCANEAEAEILKMHFSKLTEGRQTYDWTSERNMPAATALQLTVDAIQETQGTFKGTTMVEYCNKILEMMDWPEVKFKKVRMIVQRHWDPKTKKEIKMKSPTLMITKIGREEFIKRICTINTMAKDGERGKYKRRAIATPGMGIRPFSKIVETLAQKICERLAESGLPVGGNEKKAKLKTTVSSTNSKLQEGQFMVNITGDNSKWNECQQPEAYLAMLAYITKDSSNLMKDLCSVAPTLFCNKYVKMGQGFRAKNKRKTKEIVIPAKKMKERKELMNAEWRDLFETIEPYMDGECCFLGGGMLMGMFNMLSTVFGVMTLNYREEALARRNCYWTGLQSSDDFVLFCISRTWPEMEMTILKFIAVCKLMGINMSLEKSYGCLPELFEFTSMFFSGDFVSNIALELPAFTTAGMNEGTDFTAAMSVIRTNMINNGLSPGTALMALRICLQEFRATYRVHPYDSGVKNHRMKIIRKFIETIENKDGLLISDGGKLMNNISSLHIPEEILKEDLMDPSYRNRVFNPRNPFTQFEKTVDIFKASGPIRVEENEAVVSTHSFRTRSNRTLLNTDMRAMALEEKRYQVVCNMYRSVFESADVNTPIGSMSMGEAIEAKILDRARTQFENGIIGGEEYSEIKRLIEDAKRQRLSV |
| Polymerase PB2 | C | 772 | Influenza D Virus (D/Swine/Oklahoma/1334/2011) | MSLLLTLAKEYANLTKDKKSCKLLSQGTVSSYTTFKKWTTSRKEKNPSLRMRWAMGSKFPIMANREILEEAGIPEQWEGIDLWSKKDDVSKLGMVLASPAAITYWNFCGPGVDNSSVIKDVYKAKFMKKERWRETLWGPMNFELVGKQRRVVETQPVEIKLNQKEIKELTMWVLFEDEANLASKFIQENFSLVLSLRELYKGKAVNKDVAAFMIAHQFSPEKRFLPTFGPIRPERMELLHCLGGDFWKIEAVTAGSLNEEQKKRDVRAVARKICLRASVDLFTPAEKIRDYIASVTMRFGTVERTFEDVIRNSDDISAEVTLCKAALGCELGKSMSFGNLNLRKVSGEAETMEKTVYWGLKPIKYKCWRGEETFYCELRKVTCMFRRSEGLDWANIGPGSPEERRELLAMVMIFCRDGRFFESAPVNIDESFFRTRLNKEIPYQYVLLKWVRQSRDNLDALLSTRGLIPAHIGQFGKGMGIDGSSSSSMVYKGVMLSKTPIDIVESKEKHRLFLNDNIEAVTERGAMVASIMDLSEDNRETFNDVTFNHVDLAVLKDEKTAIIKIYRSLVERINTDDDGLPALIMGKRYLELYQLDEVKDAVGLIPKRMLGAYSYQARQLIQSQIKNDSYSLPEIIKLLPFCYSPPKKMLFDGTFHFKNQMYVRPGINTNLFSFSKTDKSKIYVNGSAVKIKLVLGDDEMDTSLAFVEGFQVCEYDPRAPLIPRRDLRLIGFGKKVRVFVGQGQEKTLVRTSSKRAASHDVSKNIRRMRLEV |
Experimental Data
Method: ELECTRON MICROSCOPY