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FASTA Sequence PDB Format mmCIF Format
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6KHY

The crystal structure of asfvap:ag

PDB DOI: 10.2210/pdb6khy/pdb

Classification: DNA BINDING PROTEIN
Organism(s): African Swine Fever Virus (Isolate Tick/South Africa/Pretoriuskop Pr4/1996) , Synthetic Construct

Deposited: 2019-07-16
Deposition Author(s): Chen, Y.Q. , Gan, J.H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.008 Å

6khy
Literature

The crystal structure of asfvap:ag

Chen, Y.Q. , Gan, J.H.

Primary Citation of Related Structures: 6KHY


Proteins
Molecule Chains Sequence Length Organism Sequence
Probable AP endonuclease A 301 African Swine Fever Virus (Isolate Tick/South Africa/Pretoriuskop Pr4/1996) , Synthetic Construct GSGGGMFGAFVSHRLWSDSGCTTTCITNSIANYVAFGEQIGFPFKSAQVFIAGPRKAVINIQEDDKVELLKMIVKHNLWVVAHGTYLDVPWSRRSAFVTHFIQQELLICKEVGIKGLVLHLGAVEPELIVEGLKKIKPVEGVVIYLETPHNKHHTYKYSTMEQIKELFLRIRNTRLKQIGLCIDTAHIWSSGVNISSYNDAGQWLRSLENIHSVIPPSHIMFHLNDAATECGSGIDRHASLFEGMIWKSYSHKIKQSGLYCFVEYITRHQCPAILERNLGSSMQLQTALTAEFTTLKSLLK
Probable AP endonuclease B 301 African Swine Fever Virus (Isolate Tick/South Africa/Pretoriuskop Pr4/1996) , Synthetic Construct GSGGGMFGAFVSHRLWSDSGCTTTCITNSIANYVAFGEQIGFPFKSAQVFIAGPRKAVINIQEDDKVELLKMIVKHNLWVVAHGTYLDVPWSRRSAFVTHFIQQELLICKEVGIKGLVLHLGAVEPELIVEGLKKIKPVEGVVIYLETPHNKHHTYKYSTMEQIKELFLRIRNTRLKQIGLCIDTAHIWSSGVNISSYNDAGQWLRSLENIHSVIPPSHIMFHLNDAATECGSGIDRHASLFEGMIWKSYSHKIKQSGLYCFVEYITRHQCPAILERNLGSSMQLQTALTAEFTTLKSLLK
Probable AP endonuclease C 301 African Swine Fever Virus (Isolate Tick/South Africa/Pretoriuskop Pr4/1996) , Synthetic Construct GSGGGMFGAFVSHRLWSDSGCTTTCITNSIANYVAFGEQIGFPFKSAQVFIAGPRKAVINIQEDDKVELLKMIVKHNLWVVAHGTYLDVPWSRRSAFVTHFIQQELLICKEVGIKGLVLHLGAVEPELIVEGLKKIKPVEGVVIYLETPHNKHHTYKYSTMEQIKELFLRIRNTRLKQIGLCIDTAHIWSSGVNISSYNDAGQWLRSLENIHSVIPPSHIMFHLNDAATECGSGIDRHASLFEGMIWKSYSHKIKQSGLYCFVEYITRHQCPAILERNLGSSMQLQTALTAEFTTLKSLLK
Probable AP endonuclease D 301 African Swine Fever Virus (Isolate Tick/South Africa/Pretoriuskop Pr4/1996) , Synthetic Construct GSGGGMFGAFVSHRLWSDSGCTTTCITNSIANYVAFGEQIGFPFKSAQVFIAGPRKAVINIQEDDKVELLKMIVKHNLWVVAHGTYLDVPWSRRSAFVTHFIQQELLICKEVGIKGLVLHLGAVEPELIVEGLKKIKPVEGVVIYLETPHNKHHTYKYSTMEQIKELFLRIRNTRLKQIGLCIDTAHIWSSGVNISSYNDAGQWLRSLENIHSVIPPSHIMFHLNDAATECGSGIDRHASLFEGMIWKSYSHKIKQSGLYCFVEYITRHQCPAILERNLGSSMQLQTALTAEFTTLKSLLK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA(CCTCGTCGGGGACGCTG) e 17 NA CCTCGTCGGGGACGCTG
DNA(GCAGCGTCACCGACGAGG) f 16 NA CAGCGTCACCGACGAG
DNA(CCTCGTCGGGGACGCT) g 16 NA CCTCGTCGGGGACGCT
DNA(AGCGTCACCGACGAGG) h 16 NA AGCGTCACCGACGAGG
DNA(CCTCGTCGGGGACGC) i 16 NA GCCTCGTCGGGGACGC
DNA (AGCGTCACCGACGAGGC) j 17 NA AGCGTCACCGACGAGGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-07-16
Deposition Author(s): Chen, Y.Q. , Gan, J.H.