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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6IZR

Whole structure of a 15-stranded parm filament from clostridium botulinum

PDB DOI: 10.2210/pdb6izr/pdb

Classification: PROTEIN FIBRIL
Organism(s): Clostridium Botulinum Prevot_594

Deposited: 2018-12-20
Deposition Author(s): Dandey, V.P. , Koh, F. , Lee, L.J. , Narita, A. , Popp, D. , Robinson, R.C. , Tan, Y.Z. , Tanaka, K.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.7 Å

6izr
Literature

Whole structure of a 15-stranded parm filament from clostridium botulinum

Dandey, V.P. , Koh, F. , Lee, L.J. , Narita, A. , Popp, D. , Robinson, R.C. , Tan, Y.Z. , Tanaka, K.

Primary Citation of Related Structures: 6IZR


Proteins
Molecule Chains Sequence Length Organism Sequence
Putative plasmid segregation protein ParM 1 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM 2 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM A 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM B 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM D 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM E 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM G 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM H 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM J 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM K 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM M 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM N 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM P 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM Q 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM C 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM F 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM I 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM L 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM O 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM R 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM T 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM U 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM W 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Putative plasmid segregation protein ParM X 349 Clostridium Botulinum Prevot_594 MNKYTIAIDLGYGQIKGINQDNKRVIFPSIISSGKDRSLDTFFNSIDNIVDNIHVKILDEYFNEKEYFVGELAKRQPSNSSFINRDNKINSEENKVLLATALGLLIPNDLPNDTKIHIVTGLPLEHFIKQKQALNDMLKDFEHTIKFVDHNFSRNIKFEESNITLFPQGAGAIFSKINNDISSLLIKETFIGLIDVGFKTTDIVVFRINKDKEPVFEQEMSATLDGLGMINIYNTMDKAFTDNSRDGSKLNTEQLMLLCEEGKIFFKGDYIDLKKDLIKARKTLSTNIINKADGLWGSRKNSFNSIMIAGGGGKVLYNHLKLIEPNMCQLIDNPEFANAIGYLEFGKQF
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2018-12-20
Deposition Author(s): Dandey, V.P. , Koh, F. , Lee, L.J. , Narita, A. , Popp, D. , Robinson, R.C. , Tan, Y.Z. , Tanaka, K.