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6IUD

Structure of helicobacter pylori soj-adp complex bound to dna

PDB DOI: 10.2210/pdb6iud/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Helicobacter Pylori (Strain Atcc 700392 / 26695) , Synthetic Construct

Deposited: 2018-11-28
Deposition Author(s): Chu, C.H. , Sun, Y.J. , Yen, C.Y.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.506 Å

6iud
Literature

Structure of helicobacter pylori soj-adp complex bound to dna

Chu, C.H. , Sun, Y.J. , Yen, C.Y.

Primary Citation of Related Structures: 6IUD


Proteins
Molecule Chains Sequence Length Organism Sequence
SpoOJ regulator (Soj) A 276 Helicobacter Pylori (Strain Atcc 700392 / 26695) , Synthetic Construct MRGSHHHHHHGSMMSEIIAVANQKGGVGKTTTAVNLAASLAVHEKKILLIDFDPQANATSSLGFRRDKIDYDIYHVLIGRKQISQVILKTQMPFLDLVPSNLGLAGFEKTFYDSQDENKRGELMLKNALESVVGLYDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFALEGTKLLLNTIRMLQKSTNPKLKIRGFLPTMHVPQLNLTKGVLAELFKYFDSEFFRDSATGEYIMIPKSVKLAESPSFGKPILLYDIKSNGSIAYQKLAQSILQG
SpoOJ regulator (Soj) B 276 Helicobacter Pylori (Strain Atcc 700392 / 26695) , Synthetic Construct MRGSHHHHHHGSMMSEIIAVANQKGGVGKTTTAVNLAASLAVHEKKILLIDFDPQANATSSLGFRRDKIDYDIYHVLIGRKQISQVILKTQMPFLDLVPSNLGLAGFEKTFYDSQDENKRGELMLKNALESVVGLYDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFALEGTKLLLNTIRMLQKSTNPKLKIRGFLPTMHVPQLNLTKGVLAELFKYFDSEFFRDSATGEYIMIPKSVKLAESPSFGKPILLYDIKSNGSIAYQKLAQSILQG
SpoOJ regulator (Soj) C 276 Helicobacter Pylori (Strain Atcc 700392 / 26695) , Synthetic Construct MRGSHHHHHHGSMMSEIIAVANQKGGVGKTTTAVNLAASLAVHEKKILLIDFDPQANATSSLGFRRDKIDYDIYHVLIGRKQISQVILKTQMPFLDLVPSNLGLAGFEKTFYDSQDENKRGELMLKNALESVVGLYDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFALEGTKLLLNTIRMLQKSTNPKLKIRGFLPTMHVPQLNLTKGVLAELFKYFDSEFFRDSATGEYIMIPKSVKLAESPSFGKPILLYDIKSNGSIAYQKLAQSILQG
SpoOJ regulator (Soj) D 276 Helicobacter Pylori (Strain Atcc 700392 / 26695) , Synthetic Construct MRGSHHHHHHGSMMSEIIAVANQKGGVGKTTTAVNLAASLAVHEKKILLIDFDPQANATSSLGFRRDKIDYDIYHVLIGRKQISQVILKTQMPFLDLVPSNLGLAGFEKTFYDSQDENKRGELMLKNALESVVGLYDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFALEGTKLLLNTIRMLQKSTNPKLKIRGFLPTMHVPQLNLTKGVLAELFKYFDSEFFRDSATGEYIMIPKSVKLAESPSFGKPILLYDIKSNGSIAYQKLAQSILQG

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*TP*CP*CP*CP*TP*GP*TP*TP*TP*CP*AP*CP*GP*TP*GP*GP*AP*AP*CP*AP*CP*CP*CP*T)-3') e 24 NA TCCCTGTTTCACGTGGAACACCCT
DNA (5'-D(P*AP*GP*GP*GP*TP*GP*TP*TP*CP*CP*AP*CP*GP*TP*GP*AP*AP*AP*CP*AP*GP*GP*GP*A)-3') f 24 NA AGGGTGTTCCACGTGAAACAGGGA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2018-11-28
Deposition Author(s): Chu, C.H. , Sun, Y.J. , Yen, C.Y.