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6FY3

Crystal structure of a v2-directed, rv144 vaccine-like antibody from hiv-1 infection, cap228-3d, bound to a heterologous v2 peptide

PDB DOI: 10.2210/pdb6fy3/pdb

Classification: IMMUNE SYSTEM
Organism(s): Salmonella Enterica , Anoxybacillus Sp. Lm18-11

Deposited: 2018-03-10
Deposition Author(s): Moore, P.L. , Morris, L. , Wibmer, C.K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.6 Å

6fy3
Literature

Crystal structure of a v2-directed, rv144 vaccine-like antibody from hiv-1 infection, cap228-3d, bound to a heterologous v2 peptide

Moore, P.L. , Morris, L. , Wibmer, C.K.

Primary Citation of Related Structures: 6FY3


Proteins
Molecule Chains Sequence Length Organism Sequence
CAP228-3D Heavy Chain X 238 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 EVQLVQSGAEVKKPGESLKISCKGFGYSFSTYWIAWVRQMPGKGLEWMGMIYPGDSDTKYSPSLQGQVTISGDKSISTAYLQWSSLKASDTAMYYCARLLNNYDSSGFLYWYLDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ
CAP228-3D Heavy Chain H 238 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 EVQLVQSGAEVKKPGESLKISCKGFGYSFSTYWIAWVRQMPGKGLEWMGMIYPGDSDTKYSPSLQGQVTISGDKSISTAYLQWSSLKASDTAMYYCARLLNNYDSSGFLYWYLDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ
CAP228-3D Light Chain Y 218 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 NFMLTQPHSVSESPGKTVTISCTRSSGSIASDYVQWYQQRPGSSPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDMTNHNWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
CAP228-3D Light Chain L 218 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 NFMLTQPHSVSESPGKTVTISCTRSSGSIASDYVQWYQQRPGSSPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDMTNHNWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
CAP45 V2 peptide Z 19 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 ELRDKKQKAYALFYRPDVV
CAP45 V2 peptide P 19 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 ELRDKKQKAYALFYRPDVV
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2018-03-10
Deposition Author(s): Moore, P.L. , Morris, L. , Wibmer, C.K.