PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6FY1

Crystal structure of a v2p-reactive rv144 vaccine-like antibody, cap228-16h, in complex with a scaffolded autologous v1v2

PDB DOI: 10.2210/pdb6fy1/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1

Deposited: 2018-03-10
Deposition Author(s): Moore, P.L. , Morris, L. , Wibmer, C.K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.132 Å

6fy1
Literature

Crystal structure of a v2p-reactive rv144 vaccine-like antibody, cap228-16h, in complex with a scaffolded autologous v1v2

Moore, P.L. , Morris, L. , Wibmer, C.K.

Primary Citation of Related Structures: 6FY1


Proteins
Molecule Chains Sequence Length Organism Sequence
CAP228-16H Heavy Chain Y 235 Homo Sapiens , Human Immunodeficiency Virus 1 EVQLVQSGAEVKKPGESLKISCKGSGYRFPSSWIGWVRQVPGKGLEWMGIIYPGDGETRYRASFQGQVTISADQSSNTAYLQWSSLKASDTAMYYCARHGRGVREVINAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ
CAP228-16H Heavy Chain H 235 Homo Sapiens , Human Immunodeficiency Virus 1 EVQLVQSGAEVKKPGESLKISCKGSGYRFPSSWIGWVRQVPGKGLEWMGIIYPGDGETRYRASFQGQVTISADQSSNTAYLQWSSLKASDTAMYYCARHGRGVREVINAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ
CAP228 Autologous Scaffolded V1V2 X 117 Homo Sapiens , Human Immunodeficiency Virus 1 MTTFKLAACVTLKCSTYNDSIEEEIQRCLFNTTTEIRDKKQKAYALFYKYDIVPLKGNNSEYILINCQTTTTEAVDAATAAKVFKQYANDNGIDGEWTYDDATKTFTVTEGLEVLFQ
CAP228 Autologous Scaffolded V1V2 G 117 Homo Sapiens , Human Immunodeficiency Virus 1 MTTFKLAACVTLKCSTYNDSIEEEIQRCLFNTTTEIRDKKQKAYALFYKYDIVPLKGNNSEYILINCQTTTTEAVDAATAAKVFKQYANDNGIDGEWTYDDATKTFTVTEGLEVLFQ
CAP228-16H Light Chain Z 213 Homo Sapiens , Human Immunodeficiency Virus 1 SYELTQPPSVSVAPGTTATITCGGVDIGSTLVHWYQQRPGQAPLLVIYDDSDRPSGIPERFSGSNSGNMATLTISRVEAGDEADYYCQVWHSTSAVIFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
CAP228-16H Light Chain L 213 Homo Sapiens , Human Immunodeficiency Virus 1 SYELTQPPSVSVAPGTTATITCGGVDIGSTLVHWYQQRPGQAPLLVIYDDSDRPSGIPERFSGSNSGNMATLTISRVEAGDEADYYCQVWHSTSAVIFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2018-03-10
Deposition Author(s): Moore, P.L. , Morris, L. , Wibmer, C.K.