6FKR
Crystal structure of the dolphin proline-rich antimicrobial peptide tur1a bound to the thermus thermophilus 70s ribosome
PDB DOI: 10.2210/pdb6fkr/pdb
Classification: RIBOSOME Organism(s): Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct
Deposited: 2018-01-24 Deposition Author(s): Benincasa, M. , Gambato, S. , Hilpert, K. , Hofmann, S. , Huter, P. , Innis, C.A. , Mardirossian, M. , Muller, C. , Perebaskine, N. , Tossi, A. , Wilson, D.N.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.2 Å
Crystal structure of the dolphin proline-rich antimicrobial peptide tur1a bound to the thermus thermophilus 70s ribosome
Benincasa, M. , Gambato, S. , Hilpert, K. , Hofmann, S. , Huter, P. , Innis, C.A. , Mardirossian, M. , Muller, C. , Perebaskine, N. , Tossi, A. , Wilson, D.N.
Primary Citation of Related Structures: 6FKR
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 16 ribosomal RNA | 1a | 1507 | NA | UUGGAGAGUUUGAUCCUGGCUCAGGGUGAACGCUGGCGGCGUGCCUAAGACAUGCAAGUCGUGCGGGCCGCGGGGUUUUACUCCGUGGUCAGCGGCGGACGGGUGAGUAACGCGUGGGUGACCUACCCGGAAGAGGGGGACAACCCGGGGAAACUCGGGCUAAUCCCCCAUGUGGACCCGCCCCUUGGGGUGUGUCCAAAGGGCUUUGCCCGCUUCCGGAUGGGCCCGCGUCCCAUCAGCUAGUUGGUGGGGUAAUGGCCCACCAAGGCGACGACGGGUAGCCGGUCUGAGAGGAUGGCCGGCCACAGGGGCACUGAGACACGGGCCCCACUCCUACGGGAGGCAGCAGUUAGGAAUCUUCCGCAAUGGGCGCAAGCCUGACGGAGCGACGCCGCUUGGAGGAAGAAGCCCUUCGGGGUGUAAACUCCUGAACCCGGGACGAAACCCCCGACGAGGGGACUGACGGUACCGGGGUAAUAGCGCCGGCCAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGCGCGAGCGUUACCCGGAUUCACUGGGCGUAAAGGGCGUGUAGGCGGCCUGGGGCGUCCCAUGUGAAAGACCACGGCUCAACCGUGGGGGAGCGUGGGAUACGCUCAGGCUAGACGGUGGGAGAGGGUGGUGGAAUUCCCGGAGUAGCGGUGAAAUGCGCAGAUACCGGGAGGAACGCCGAUGGCGAAGGCAGCCACCUGGUCCACCCGUGACGCUGAGGCGCGAAAGCGUGGGGAGCAAACCGGAUUAGAUACCCGGGUAGUCCACGCCCUAAACGAUGCGCGCUAGGUCUCUGGGUCUCCUGGGGGCCGAAGCUAACGCGUUAAGCGCGCCGCCUGGGGAGUACGGCCGCAAGGCUGAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGAAGAACCUUACCAGGCCUUGACAUGCUAGGGAACCCGGGUGAAAGCCUGGGGUGCCCCGCGAGGGGAGCCCUAGCACAGGUGCUGCAUGGCCGUCGUCAGCUCGUGCCGUGAGGUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCCCGCCGUUAGUUGCCAGCGGUUCGGCCGGGCACUCUAACGGGACUGCCCGCGAAAGCGGGAGGAAGGAGGGGACGACGUCUGGUCAGCAUGGCCCUUACGGCCUGGGCGACACACGUGCUACAAUGCCCACUACAAAGCGAUGCCACCCGGCAACGGGGAGCUAAUCGCAAAAAGGUGGGCCCAGUUCGGAUUGGGGUCUGCAACCCGACCCCAUGAAGCCGGAAUCGCUAGUAAUCGCGGAUCAGCCAUGCCGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACGCCAUGGGAGCGGGCUCUACCCGAAGUCGCCGGGAGCCUACGGGCAGGCGCCGAGGGUAGGGCCCGUGACUGGGGCGAAGUCGUAACAAGGUAGCUGUACCGGAAGGUGCGGCUGGAUC |
| 16 ribosomal RNA | 2a | 1507 | NA | UUGGAGAGUUUGAUCCUGGCUCAGGGUGAACGCUGGCGGCGUGCCUAAGACAUGCAAGUCGUGCGGGCCGCGGGGUUUUACUCCGUGGUCAGCGGCGGACGGGUGAGUAACGCGUGGGUGACCUACCCGGAAGAGGGGGACAACCCGGGGAAACUCGGGCUAAUCCCCCAUGUGGACCCGCCCCUUGGGGUGUGUCCAAAGGGCUUUGCCCGCUUCCGGAUGGGCCCGCGUCCCAUCAGCUAGUUGGUGGGGUAAUGGCCCACCAAGGCGACGACGGGUAGCCGGUCUGAGAGGAUGGCCGGCCACAGGGGCACUGAGACACGGGCCCCACUCCUACGGGAGGCAGCAGUUAGGAAUCUUCCGCAAUGGGCGCAAGCCUGACGGAGCGACGCCGCUUGGAGGAAGAAGCCCUUCGGGGUGUAAACUCCUGAACCCGGGACGAAACCCCCGACGAGGGGACUGACGGUACCGGGGUAAUAGCGCCGGCCAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGCGCGAGCGUUACCCGGAUUCACUGGGCGUAAAGGGCGUGUAGGCGGCCUGGGGCGUCCCAUGUGAAAGACCACGGCUCAACCGUGGGGGAGCGUGGGAUACGCUCAGGCUAGACGGUGGGAGAGGGUGGUGGAAUUCCCGGAGUAGCGGUGAAAUGCGCAGAUACCGGGAGGAACGCCGAUGGCGAAGGCAGCCACCUGGUCCACCCGUGACGCUGAGGCGCGAAAGCGUGGGGAGCAAACCGGAUUAGAUACCCGGGUAGUCCACGCCCUAAACGAUGCGCGCUAGGUCUCUGGGUCUCCUGGGGGCCGAAGCUAACGCGUUAAGCGCGCCGCCUGGGGAGUACGGCCGCAAGGCUGAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGAAGAACCUUACCAGGCCUUGACAUGCUAGGGAACCCGGGUGAAAGCCUGGGGUGCCCCGCGAGGGGAGCCCUAGCACAGGUGCUGCAUGGCCGUCGUCAGCUCGUGCCGUGAGGUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCCCGCCGUUAGUUGCCAGCGGUUCGGCCGGGCACUCUAACGGGACUGCCCGCGAAAGCGGGAGGAAGGAGGGGACGACGUCUGGUCAGCAUGGCCCUUACGGCCUGGGCGACACACGUGCUACAAUGCCCACUACAAAGCGAUGCCACCCGGCAACGGGGAGCUAAUCGCAAAAAGGUGGGCCCAGUUCGGAUUGGGGUCUGCAACCCGACCCCAUGAAGCCGGAAUCGCUAGUAAUCGCGGAUCAGCCAUGCCGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACGCCAUGGGAGCGGGCUCUACCCGAAGUCGCCGGGAGCCUACGGGCAGGCGCCGAGGGUAGGGCCCGUGACUGGGGCGAAGUCGUAACAAGGUAGCUGUACCGGAAGGUGCGGCUGGAUC |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 30S ribosomal protein S15 | 1O | 88 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | PITKEEKQKVIQEFARFPGDTGSTEVQVALLTLRINRLSEHLKVHKKDHHSHRGLLMMVGQRRRLLRYLQREDPERYRALIEKLGIRG |
| 30S ribosomal protein S15 | 2O | 88 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | PITKEEKQKVIQEFARFPGDTGSTEVQVALLTLRINRLSEHLKVHKKDHHSHRGLLMMVGQRRRLLRYLQREDPERYRALIEKLGIRG |
| 30S ribosomal protein S16 | 1P | 82 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MVKIRLARFGSKHNPHYRIVVTDARRKRDGKYIEKIGYYDPRKTTPDWLKVDVERARYWLSVGAQPTDTARRLLRQAGVFRQ |
| 30S ribosomal protein S16 | 2P | 82 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MVKIRLARFGSKHNPHYRIVVTDARRKRDGKYIEKIGYYDPRKTTPDWLKVDVERARYWLSVGAQPTDTARRLLRQAGVFRQ |
| 30S ribosomal protein S17 | 1Q | 99 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | PKKVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEEKYKLGDVVEIIESRPISKRKRFRVLRLVESGRMDLVEKYLIRRQNYESLSK |
| 30S ribosomal protein S17 | 2Q | 99 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | PKKVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEEKYKLGDVVEIIESRPISKRKRFRVLRLVESGRMDLVEKYLIRRQNYESLSK |
| 30S ribosomal protein S18 | 1R | 68 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | AKVKATLGEFDLRDYRNVEVLKRFLSETGKILPRRRTGLSAKEQRILAKTIKRARILGLLPFTEKLVR |
| 30S ribosomal protein S18 | 2R | 68 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | AKVKATLGEFDLRDYRNVEVLKRFLSETGKILPRRRTGLSAKEQRILAKTIKRARILGLLPFTEKLVR |
| 30S ribosomal protein S19 | 1S | 83 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | PRSLKKGVFVDDHLLEKVLELNAKGEKRLIKTWSRRSTIVPEMVGHTIAVYNGKQHVPVYITENMVGHKLGEFAPTRTYRGHG |
| 30S ribosomal protein S19 | 2S | 83 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | PRSLKKGVFVDDHLLEKVLELNAKGEKRLIKTWSRRSTIVPEMVGHTIAVYNGKQHVPVYITENMVGHKLGEFAPTRTYRGHG |
| 30S ribosomal protein S20 | 1T | 96 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | RNLSALKRHRQSLKRRLRNKAKKSAIKTLSKKAIQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLLEAAGAPLIGGG |
| 30S ribosomal protein S20 | 2T | 96 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | RNLSALKRHRQSLKRRLRNKAKKSAIKTLSKKAIQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLLEAAGAPLIGGG |
| 30S ribosomal protein Thx | 1U | 23 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | GKGDRRTRRGKIWRGTYGKYRPR |
| 30S ribosomal protein Thx | 2U | 23 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | GKGDRRTRRGKIWRGTYGKYRPR |
| 50S ribosomal protein L21 | 1V | 101 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MFAIVKTGGKQYRVEPGLKLRVEKLDAEPGATVELPVLLLGGEKTVVGTPVVEGASVVAEVLGHGRGKKILVSKFKAKVQYRRKKGHRQPYTELLIKEIRG |
| 50S ribosomal protein L21 | 2V | 101 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MFAIVKTGGKQYRVEPGLKLRVEKLDAEPGATVELPVLLLGGEKTVVGTPVVEGASVVAEVLGHGRGKKILVSKFKAKVQYRRKKGHRQPYTELLIKEIRG |
| 50S ribosomal protein L22 | 1W | 112 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MEAKAIARYVRISPRKVRLVVDLIRGKSLEEARNILRYTNKRGAYFVAKVLESAAANAVNNHDMLEDRLYVKAAYVDEGPALKRVLPRARGRADIIKKRTSHITVILGEKHG |
| 50S ribosomal protein L22 | 2W | 112 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MEAKAIARYVRISPRKVRLVVDLIRGKSLEEARNILRYTNKRGAYFVAKVLESAAANAVNNHDMLEDRLYVKAAYVDEGPALKRVLPRARGRADIIKKRTSHITVILGEKHG |
| 50S ribosomal protein L23 | 1X | 95 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MKTAYDVILAPVLSEKAYAGFAEGKYTFWVHPKATKTEIKNAVETAFKVKVVKVNTLHVRGKKKRLGRYLGKRPDRKKAIVQVAPGQKIEALEGL |
| 50S ribosomal protein L23 | 2X | 95 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MKTAYDVILAPVLSEKAYAGFAEGKYTFWVHPKATKTEIKNAVETAFKVKVVKVNTLHVRGKKKRLGRYLGKRPDRKKAIVQVAPGQKIEALEGL |
| 30S ribosomal protein S2 | 1B | 231 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | VKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAMRGGTILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFASPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQARGGVVEPSPSYA |
| 30S ribosomal protein S2 | 2B | 231 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | VKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAMRGGTILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFASPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQARGGVVEPSPSYA |
| Tur1A peptide | 1Y | 22 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | RRIRFRPPYLPRPGRRPRFPPP |
| 50S ribosomal protein L24 | 2Y | 107 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MRVKMHVKKGDTVLVASGKYKGRVGKVKEVLPKKYAVIVEGVNIVKKAVRVSPKYPQGGFIEKEAPLHASKVRPICPACGKPTRVRKKFLENGKKIRVCAKCGGALD |
| Ribosome-associated inhibitor A | 1Z | 97 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | TMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKEPQGFVADATINTPNGVLVASGKHEDMYTAINELINKLERQLNKLQHKGEARRAA |
| Ribosome-associated inhibitor A | 2Z | 97 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | TMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKEPQGFVADATINTPNGVLVASGKHEDMYTAINELINKLERQLNKLQHKGEARRAA |
| 50S ribosomal protein L27 | 10 | 77 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | GSTRNGRDSQAKRLGVKRYEGQVVRAGNILVRQRGTRFKPGKNVGMGRDFTLFALVDGVVEFQDRGRLGRYVHVRPL |
| 50S ribosomal protein L27 | 20 | 77 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | GSTRNGRDSQAKRLGVKRYEGQVVRAGNILVRQRGTRFKPGKNVGMGRDFTLFALVDGVVEFQDRGRLGRYVHVRPL |
| 50S ribosomal protein L28 | 11 | 97 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | SKVCEISGKRPIVANSIQRRGKAKREGGVGKKTTGISKRRQYPNLQKVRVRVAGQEITFRVAASHIPKVYELVERAKGLKLEGLSPKEIKKELLKLL |
| 50S ribosomal protein L28 | 21 | 97 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | SKVCEISGKRPIVANSIQRRGKAKREGGVGKKTTGISKRRQYPNLQKVRVRVAGQEITFRVAASHIPKVYELVERAKGLKLEGLSPKEIKKELLKLL |
| 50S ribosomal protein L29 | 12 | 70 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MKLSEVRKQLEEARKLSPVELEKLVREKKRELMELRFQASIGQLSQNHKIRDLKRQIARLLTVLNEKRRQ |
| 50S ribosomal protein L29 | 22 | 70 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MKLSEVRKQLEEARKLSPVELEKLVREKKRELMELRFQASIGQLSQNHKIRDLKRQIARLLTVLNEKRRQ |
| 50S ribosomal protein L30 | 13 | 59 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | PRLKVKLVKSPIGYPKDQKAALKALGLRRLQQERVLEDTPAIRGNVEKVAHLVRVEVVE |
| 50S ribosomal protein L30 | 23 | 59 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | PRLKVKLVKSPIGYPKDQKAALKALGLRRLQQERVLEDTPAIRGNVEKVAHLVRVEVVE |
| 50S ribosomal protein L31 | 14 | 69 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MKEGIHPKLVPARIICGCGNVIETYSTKPEIYVEVCSKCHPFYTGQQRFVDTEGRVERFQRRYGDSYRK |
| 50S ribosomal protein L31 | 24 | 69 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MKEGIHPKLVPARIICGCGNVIETYSTKPEIYVEVCSKCHPFYTGQQRFVDTEGRVERFQRRYGDSYRK |
| 50S ribosomal protein L32 | 15 | 59 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | AKHPVPKKKTSKARRDARRSHHALTPPTLVPCPECKAMKPPHTVCPECGYYAGRKVLEV |
| 50S ribosomal protein L32 | 25 | 59 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | AKHPVPKKKTSKARRDARRSHHALTPPTLVPCPECKAMKPPHTVCPECGYYAGRKVLEV |
| 50S ribosomal protein L33 | 16 | 53 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | ASEVRIKLLLECTECKRRNYATEKNKRNTPNKLELRKYCPWCRKHTVHREVKI |
| 50S ribosomal protein L33 | 26 | 53 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | ASEVRIKLLLECTECKRRNYATEKNKRNTPNKLELRKYCPWCRKHTVHREVKI |
| 50S ribosomal protein L34 | 17 | 48 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MKRTWQPNRRKRAKTHGFRARMRTPGGRKVLKRRRQKGRWRLTPAVRK |
| 50S ribosomal protein L34 | 27 | 48 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MKRTWQPNRRKRAKTHGFRARMRTPGGRKVLKRRRQKGRWRLTPAVRK |
| 30S ribosomal protein S4 | 1D | 208 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | GRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQKLRRIYGISERQFRNLFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLDVEGMKGKFLRLPDREDLALPVNEQLVIEFYSR |
| 30S ribosomal protein S4 | 2D | 208 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | GRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQKLRRIYGISERQFRNLFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLDVEGMKGKFLRLPDREDLALPVNEQLVIEFYSR |
| 50S ribosomal protein L35 | 18 | 64 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | PKMKTHKGAKKRVKITASGKVVAMKTGKRHLNWQKSGKEIRQKGRKFVLAKPEAERIKLLLPYE |
| 50S ribosomal protein L35 | 28 | 64 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | PKMKTHKGAKKRVKITASGKVVAMKTGKRHLNWQKSGKEIRQKGRKFVLAKPEAERIKLLLPYE |
| 50S ribosomal protein L36 | 19 | 37 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MKVRASVKRICDKCKVIRRHGRVYVICENPKHKQRQG |
| 50S ribosomal protein L36 | 29 | 37 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MKVRASVKRICDKCKVIRRHGRVYVICENPKHKQRQG |
| 30S ribosomal protein S3 | 1C | 206 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | GNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRANIDYGFALARTTYGVLGVKAYIFLGEV |
| 30S ribosomal protein S3 | 2C | 206 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | GNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRANIDYGFALARTTYGVLGVKAYIFLGEV |
| 50S ribosomal protein L3 | 1E | 204 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MKGILGVKVGMTRIFRDDRAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRVNRPLKGHFAKAGVEPVRILREIRDFNPEGDTVTVEIFKPGERVDVTGTSKGRGFAGVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVMNLEVVDVIPEENLLLVKGAVPGPNGGLVIVRETKKA |
| 50S ribosomal protein L3 | 2E | 204 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MKGILGVKVGMTRIFRDDRAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRVNRPLKGHFAKAGVEPVRILREIRDFNPEGDTVTVEIFKPGERVDVTGTSKGRGFAGVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVMNLEVVDVIPEENLLLVKGAVPGPNGGLVIVRETKKA |
| 50S ribosomal protein L4 | 1F | 203 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | VYQIPVLSPSGRRELAADLPAEINPHLLWEVVRWQLAKRRRGTASTKTRGEVAYSGRKIWPQKHTGRARHGDIGAPIFVGGGVVFGPKPRDYSYTLPKKVRKKGLAMAVADRAREGKLLLVEAFAGVNGKTKEFLAWAKEAGLDGSESVLLVTGNELVRRAARNLPWVVTLAPEGLNVYDIVRTERLVMDLDAWEVFQNRIGG |
| 50S ribosomal protein L4 | 2F | 203 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | VYQIPVLSPSGRRELAADLPAEINPHLLWEVVRWQLAKRRRGTASTKTRGEVAYSGRKIWPQKHTGRARHGDIGAPIFVGGGVVFGPKPRDYSYTLPKKVRKKGLAMAVADRAREGKLLLVEAFAGVNGKTKEFLAWAKEAGLDGSESVLLVTGNELVRRAARNLPWVVTLAPEGLNVYDIVRTERLVMDLDAWEVFQNRIGG |
| 50S ribosomal protein L5 | 1G | 181 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | PLDVALKRKYYEEVRPELIRRFGYQNVWEVPRLEKVVINQGLGEAKEDARILEKAAQELALITGQKPAVTRAKKSISNFKLRKGMPIGLRVTLRRDRMWIFLEKLLNVALPRIRDFRGLNPNSFDGRGNYNLGLREQLIFPEITYDMVDALRGMDIAVVTTAETDEEARALLELLGFPFRK |
| 50S ribosomal protein L5 | 2G | 181 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | PLDVALKRKYYEEVRPELIRRFGYQNVWEVPRLEKVVINQGLGEAKEDARILEKAAQELALITGQKPAVTRAKKSISNFKLRKGMPIGLRVTLRRDRMWIFLEKLLNVALPRIRDFRGLNPNSFDGRGNYNLGLREQLIFPEITYDMVDALRGMDIAVVTTAETDEEARALLELLGFPFRK |
| 50S ribosomal protein L6 | 1H | 174 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | SRIGRLPIPVPKGVSVEVAPGRVKVKGPKGELEVPVSPEMRVVVEEGVVRVERPSDERRHKSLHGLTRTLIANAVKGVSEGYSKELLIKGIGYRARLVGRALELTVGFSHPVVVEPPEGITFEVPEPTRVRVSGIDKQKVGQVAANIRAIRKPSAYHEKGIYYAGEPVRLKPGK |
| 50S ribosomal protein L6 | 2H | 174 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | SRIGRLPIPVPKGVSVEVAPGRVKVKGPKGELEVPVSPEMRVVVEEGVVRVERPSDERRHKSLHGLTRTLIANAVKGVSEGYSKELLIKGIGYRARLVGRALELTVGFSHPVVVEPPEGITFEVPEPTRVRVSGIDKQKVGQVAANIRAIRKPSAYHEKGIYYAGEPVRLKPGK |
| 50S ribosomal protein L9 | 1I | 147 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MKVILLEPLENLGDVGQVVDVKPGYARNYLLPRGLAVLATESNLKALEARIRAQAKRLAERKAEAERLKEILENLTLTIPVRAGETKIYGSVTAKDIAEALSRQHGVTIDPKRLALEKPIKELGEYVLTYKPHPEVPIQLKVSVVAQ |
| 50S ribosomal protein L9 | 2I | 147 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MKVILLEPLENLGDVGQVVDVKPGYARNYLLPRGLAVLATESNLKALEARIRAQAKRLAERKAEAERLKEILENLTLTIPVRAGETKIYGSVTAKDIAEALSRQHGVTIDPKRLALEKPIKELGEYVLTYKPHPEVPIQLKVSVVAQ |
| 30S ribosomal protein S10 | 1J | 97 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | IRIKLRGFDHKTLDASAQKIVEAARRSGAQVSGPIPLPTRVRRFTVIRGPFKHKDSREHFELRTHNRLVDIINPNRKTIEQLMTLDLPTGVEIEIKT |
| 30S ribosomal protein S10 | 2J | 97 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | IRIKLRGFDHKTLDASAQKIVEAARRSGAQVSGPIPLPTRVRRFTVIRGPFKHKDSREHFELRTHNRLVDIINPNRKTIEQLMTLDLPTGVEIEIKT |
| 30S ribosomal protein S11 | 1K | 114 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | QVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFR |
| 30S ribosomal protein S11 | 2K | 114 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | QVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFR |
| 30S ribosomal protein S12 | 1L | 122 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKXLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPK |
| 30S ribosomal protein S12 | 2L | 122 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKXLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPK |
| 30S ribosomal protein S13 | 1M | 116 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTV |
| 30S ribosomal protein S13 | 2M | 116 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTV |
| 50S ribosomal protein L13 | 1N | 140 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MKTYVPKQVEPRWVLIDAEGKTLGRLATKIATLLRGKHRPDWTPNVAMGDFVVVVNADKIRVTGKKLEQKIYTRYSGYPGGLKKIPLEKMLATHPERVLEHAVKGMLPKGPLGRRLFKRLKVYAGPDHPHQAQRPEKLEV |
| 50S ribosomal protein L13 | 2N | 140 | Escherichia Coli (Strain K12) , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct | MKTYVPKQVEPRWVLIDAEGKTLGRLATKIATLLRGKHRPDWTPNVAMGDFVVVVNADKIRVTGKKLEQKIYTRYSGYPGGLKKIPLEKMLATHPERVLEHAVKGMLPKGPLGRRLFKRLKVYAGPDHPHQAQRPEKLEV |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2018-01-24 Deposition Author(s): Benincasa, M. , Gambato, S. , Hilpert, K. , Hofmann, S. , Huter, P. , Innis, C.A. , Mardirossian, M. , Muller, C. , Perebaskine, N. , Tossi, A. , Wilson, D.N.