6CVO
Human aprataxin (aptx) bound to nicked rna-dna, amp and zn product complex
PDB DOI: 10.2210/pdb6cvo/pdb
Classification: HYDROLASE/DNA/RNA Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2018-03-28 Deposition Author(s): Schellenberg, M.J. , Tumbale, P.P. , Williams, R.S.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.4 Å
Human aprataxin (aptx) bound to nicked rna-dna, amp and zn product complex
Schellenberg, M.J. , Tumbale, P.P. , Williams, R.S.
Primary Citation of Related Structures: 6CVO
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Aprataxin | A | 182 | Homo Sapiens , Synthetic Construct | GSHMGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRKHWTQ |
| Aprataxin | B | 182 | Homo Sapiens , Synthetic Construct | GSHMGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRKHWTQ |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA/RNA (5'-R(P*G)-D(P*TP*TP*CP*TP*AP*TP*AP*TP*AP*TP*AP*GP*AP*AP*CP*GP*CP*TP*GP*TP*T)-3') | d | 22 | NA | GTTCTATATATAGAACGCTGTT |
| DNA/RNA (5'-R(P*G)-D(P*TP*TP*CP*TP*AP*TP*AP*TP*AP*TP*AP*GP*AP*AP*CP*GP*CP*TP*GP*TP*T)-3') | g | 22 | NA | GTTCTATATATAGAACGCTGTT |
| DNA (5'-D(*AP*AP*CP*AP*GP*C)-3') | e | 6 | NA | AACAGC |
| DNA (5'-D(*AP*AP*CP*AP*GP*C)-3') | h | 6 | NA | AACAGC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2018-03-28 Deposition Author(s): Schellenberg, M.J. , Tumbale, P.P. , Williams, R.S.