PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6CDM

Structure of vaccine-elicited hiv-1 neutralizing antibody vfp7.04 in complex with hiv-1 fusion peptide residue 512-519

PDB DOI: 10.2210/pdb6cdm/pdb

Classification: IMMUNE SYSTEM
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2018-02-08
Deposition Author(s): Kwong, P.D. , Liu, K. , Xu, K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.408 Å

6cdm
Literature

Structure of vaccine-elicited hiv-1 neutralizing antibody vfp7.04 in complex with hiv-1 fusion peptide residue 512-519

Kwong, P.D. , Liu, K. , Xu, K.

Primary Citation of Related Structures: 6CDM


Proteins
Molecule Chains Sequence Length Organism Sequence
vFP7.04 heavy chain A 221 Mus Musculus , Synthetic Construct QVQLQQSGAELVRPGASVTLSCKASGYTFTDYEMHWVKQTPVHGLEWIGAIVPETGFTAYTQKFKGKAMLTADKSSSTAYMELRSLTSEDSAVYFCSRLRLYWYFDVWGTGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
vFP7.04 heavy chain D 221 Mus Musculus , Synthetic Construct QVQLQQSGAELVRPGASVTLSCKASGYTFTDYEMHWVKQTPVHGLEWIGAIVPETGFTAYTQKFKGKAMLTADKSSSTAYMELRSLTSEDSAVYFCSRLRLYWYFDVWGTGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
vFP7.04 light chain B 219 Mus Musculus , Synthetic Construct GVLMTQTPLSLPVRLGDQASISCRSSQSIVYSNGNTYLEWYLQRPGQSPKLLIYKVSNRFSGVPDRVSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
vFP7.04 light chain E 219 Mus Musculus , Synthetic Construct GVLMTQTPLSLPVRLGDQASISCRSSQSIVYSNGNTYLEWYLQRPGQSPKLLIYKVSNRFSGVPDRVSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
HIV fusion peptide (512-519) C 8 Mus Musculus , Synthetic Construct AVGIGAVF
HIV fusion peptide (512-519) F 8 Mus Musculus , Synthetic Construct AVGIGAVF
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2018-02-08
Deposition Author(s): Kwong, P.D. , Liu, K. , Xu, K.