6C6Q
Crystal structure of the murine norovirus vp1 p domain in complex with the cd300lf receptor
PDB DOI: 10.2210/pdb6c6q/pdb
Classification: VIRAL PROTEIN/LIPID BINDING PROTEIN Organism(s): Murine Norovirus 1 , Mus Musculus
Deposited: 2018-01-19 Deposition Author(s): Fremont, D.H. , Nelson, C.A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2 Å
Crystal structure of the murine norovirus vp1 p domain in complex with the cd300lf receptor
Primary Citation of Related Structures: 6C6Q
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Capsid protein VP1 | A | 303 | Murine Norovirus 1 , Mus Musculus | MVDLPVIQPRLCTHARWPAPVYGLLVDPSLPSNPQWQNGRVHVDGTLLGTTPISGSWVSCFAAEAAYKFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNADQAPYQGRVFASVTAAASLDLVDGRVRAVPRSIYGFQDTIPEYNDGLLVPLAPPIGPFLPGEVLLRFRTYMRQIDTADAAAEAIDCALPQEFVSWFASNAFTVQSEALLLRYRNTLTGQLLFECKLYNEGYIALSYSGSGPLTFPTDGIFEVVSWVPRLYQLASVG |
| Capsid protein VP1 | B | 303 | Murine Norovirus 1 , Mus Musculus | MVDLPVIQPRLCTHARWPAPVYGLLVDPSLPSNPQWQNGRVHVDGTLLGTTPISGSWVSCFAAEAAYKFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNADQAPYQGRVFASVTAAASLDLVDGRVRAVPRSIYGFQDTIPEYNDGLLVPLAPPIGPFLPGEVLLRFRTYMRQIDTADAAAEAIDCALPQEFVSWFASNAFTVQSEALLLRYRNTLTGQLLFECKLYNEGYIALSYSGSGPLTFPTDGIFEVVSWVPRLYQLASVG |
| CMRF35-like molecule 1 | D | 113 | Murine Norovirus 1 , Mus Musculus | MEDPVTGPEEVSGQEQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMSDAGIYWCGITKGGLDPMFKVTVNIGPVPT |
| CMRF35-like molecule 1 | F | 113 | Murine Norovirus 1 , Mus Musculus | MEDPVTGPEEVSGQEQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMSDAGIYWCGITKGGLDPMFKVTVNIGPVPT |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2018-01-19 Deposition Author(s): Fremont, D.H. , Nelson, C.A.