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FASTA Sequence PDB Format mmCIF Format
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6BWY

Dna substrate selection by apobec3g

PDB DOI: 10.2210/pdb6bwy/pdb

Classification: HYDROLASE
Organism(s): Salmonella Enterica , Legionella Pneumophila Subsp. Pneumophila Atcc 43290 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2017-12-15
Deposition Author(s): Buzovetsky, O. , Ziegler, S.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.9 Å

6bwy
Literature

Dna substrate selection by apobec3g

Buzovetsky, O. , Ziegler, S.J.

Primary Citation of Related Structures: 6BWY


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (30-MER) i 30 NA AGAAGACCCAAAGAAGAGGAAGCAGGTTAC
DNA (30-MER) c 30 NA AGAAGACCCAAAGAAGAGGAAGCAGGTTAC
DNA (30-MER) d 30 NA AGAAGACCCAAAGAAGAGGAAGCAGGTTAC
DNA (30-MER) f 30 NA AGAAGACCCAAAGAAGAGGAAGCAGGTTAC

Proteins
Molecule Chains Sequence Length Organism Sequence
Protection of telomeres protein 1, DNA dC->dU-editing enzyme APOBEC-3G fusion A 361 Salmonella Enterica , Legionella Pneumophila Subsp. Pneumophila Atcc 43290 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MVIDSLQLNELLNAGEYKIGELTFQSIRSSQELQKKNTIVNLFGIVKDFTPSRQSLHGTKDWVTTVYLWDPTCDTSSIGLQIHLFSKQGNDLPVIKQVGQPLLLHQITLRSYRDRTQGLSKDQFRYALWPDFSSNSKDTLCPQPMPRLMKTGDKEEQFALLLNKIWDEQTNHSMDPPTFTFNFNNEPWVRGRHETYLCYEVERMHNDTWVKLNQRRGFLANQAPHKHGFLEGRHAELCFLDVIPFWKLDLDQDYRVTCFTSWSPCFSCAQEMAKFISKNKHVSLCIKTARIYDDQGRAQEGLRTLAEAGAKISIMTYSEFKHCWDTFVDHQGAPFQPWDGLDEHSQDLSGRLRAILQNQEN
Protection of telomeres protein 1, DNA dC->dU-editing enzyme APOBEC-3G fusion B 361 Salmonella Enterica , Legionella Pneumophila Subsp. Pneumophila Atcc 43290 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MVIDSLQLNELLNAGEYKIGELTFQSIRSSQELQKKNTIVNLFGIVKDFTPSRQSLHGTKDWVTTVYLWDPTCDTSSIGLQIHLFSKQGNDLPVIKQVGQPLLLHQITLRSYRDRTQGLSKDQFRYALWPDFSSNSKDTLCPQPMPRLMKTGDKEEQFALLLNKIWDEQTNHSMDPPTFTFNFNNEPWVRGRHETYLCYEVERMHNDTWVKLNQRRGFLANQAPHKHGFLEGRHAELCFLDVIPFWKLDLDQDYRVTCFTSWSPCFSCAQEMAKFISKNKHVSLCIKTARIYDDQGRAQEGLRTLAEAGAKISIMTYSEFKHCWDTFVDHQGAPFQPWDGLDEHSQDLSGRLRAILQNQEN
Protection of telomeres protein 1, DNA dC->dU-editing enzyme APOBEC-3G fusion E 361 Salmonella Enterica , Legionella Pneumophila Subsp. Pneumophila Atcc 43290 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MVIDSLQLNELLNAGEYKIGELTFQSIRSSQELQKKNTIVNLFGIVKDFTPSRQSLHGTKDWVTTVYLWDPTCDTSSIGLQIHLFSKQGNDLPVIKQVGQPLLLHQITLRSYRDRTQGLSKDQFRYALWPDFSSNSKDTLCPQPMPRLMKTGDKEEQFALLLNKIWDEQTNHSMDPPTFTFNFNNEPWVRGRHETYLCYEVERMHNDTWVKLNQRRGFLANQAPHKHGFLEGRHAELCFLDVIPFWKLDLDQDYRVTCFTSWSPCFSCAQEMAKFISKNKHVSLCIKTARIYDDQGRAQEGLRTLAEAGAKISIMTYSEFKHCWDTFVDHQGAPFQPWDGLDEHSQDLSGRLRAILQNQEN
Protection of telomeres protein 1, DNA dC->dU-editing enzyme APOBEC-3G fusion G 361 Salmonella Enterica , Legionella Pneumophila Subsp. Pneumophila Atcc 43290 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MVIDSLQLNELLNAGEYKIGELTFQSIRSSQELQKKNTIVNLFGIVKDFTPSRQSLHGTKDWVTTVYLWDPTCDTSSIGLQIHLFSKQGNDLPVIKQVGQPLLLHQITLRSYRDRTQGLSKDQFRYALWPDFSSNSKDTLCPQPMPRLMKTGDKEEQFALLLNKIWDEQTNHSMDPPTFTFNFNNEPWVRGRHETYLCYEVERMHNDTWVKLNQRRGFLANQAPHKHGFLEGRHAELCFLDVIPFWKLDLDQDYRVTCFTSWSPCFSCAQEMAKFISKNKHVSLCIKTARIYDDQGRAQEGLRTLAEAGAKISIMTYSEFKHCWDTFVDHQGAPFQPWDGLDEHSQDLSGRLRAILQNQEN
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-12-15
Deposition Author(s): Buzovetsky, O. , Ziegler, S.J.