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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6BWY

Dna substrate selection by apobec3g

PDB DOI: 10.2210/pdb6bwy/pdb

Classification: HYDROLASE
Organism(s): Homo Sapiens , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) , Synthetic Construct

Deposited: 2017-12-15
Deposition Author(s): Buzovetsky, O. , Ziegler, S.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.9 Å

Literature

Dna substrate selection by apobec3g

Buzovetsky, O. , Ziegler, S.J.

Primary Citation of Related Structures: 6BWY


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (30-MER) i 30 NA AGAAGACCCAAAGAAGAGGAAGCAGGTTAC
DNA (30-MER) c 30 NA AGAAGACCCAAAGAAGAGGAAGCAGGTTAC
DNA (30-MER) d 30 NA AGAAGACCCAAAGAAGAGGAAGCAGGTTAC
DNA (30-MER) f 30 NA AGAAGACCCAAAGAAGAGGAAGCAGGTTAC

Proteins
Molecule Chains Sequence Length Organism Sequence
Protection of telomeres protein 1, DNA dC->dU-editing enzyme APOBEC-3G fusion A 361 Homo Sapiens , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) , Synthetic Construct MVIDSLQLNELLNAGEYKIGELTFQSIRSSQELQKKNTIVNLFGIVKDFTPSRQSLHGTKDWVTTVYLWDPTCDTSSIGLQIHLFSKQGNDLPVIKQVGQPLLLHQITLRSYRDRTQGLSKDQFRYALWPDFSSNSKDTLCPQPMPRLMKTGDKEEQFALLLNKIWDEQTNHSMDPPTFTFNFNNEPWVRGRHETYLCYEVERMHNDTWVKLNQRRGFLANQAPHKHGFLEGRHAELCFLDVIPFWKLDLDQDYRVTCFTSWSPCFSCAQEMAKFISKNKHVSLCIKTARIYDDQGRAQEGLRTLAEAGAKISIMTYSEFKHCWDTFVDHQGAPFQPWDGLDEHSQDLSGRLRAILQNQEN
Protection of telomeres protein 1, DNA dC->dU-editing enzyme APOBEC-3G fusion B 361 Homo Sapiens , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) , Synthetic Construct MVIDSLQLNELLNAGEYKIGELTFQSIRSSQELQKKNTIVNLFGIVKDFTPSRQSLHGTKDWVTTVYLWDPTCDTSSIGLQIHLFSKQGNDLPVIKQVGQPLLLHQITLRSYRDRTQGLSKDQFRYALWPDFSSNSKDTLCPQPMPRLMKTGDKEEQFALLLNKIWDEQTNHSMDPPTFTFNFNNEPWVRGRHETYLCYEVERMHNDTWVKLNQRRGFLANQAPHKHGFLEGRHAELCFLDVIPFWKLDLDQDYRVTCFTSWSPCFSCAQEMAKFISKNKHVSLCIKTARIYDDQGRAQEGLRTLAEAGAKISIMTYSEFKHCWDTFVDHQGAPFQPWDGLDEHSQDLSGRLRAILQNQEN
Protection of telomeres protein 1, DNA dC->dU-editing enzyme APOBEC-3G fusion E 361 Homo Sapiens , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) , Synthetic Construct MVIDSLQLNELLNAGEYKIGELTFQSIRSSQELQKKNTIVNLFGIVKDFTPSRQSLHGTKDWVTTVYLWDPTCDTSSIGLQIHLFSKQGNDLPVIKQVGQPLLLHQITLRSYRDRTQGLSKDQFRYALWPDFSSNSKDTLCPQPMPRLMKTGDKEEQFALLLNKIWDEQTNHSMDPPTFTFNFNNEPWVRGRHETYLCYEVERMHNDTWVKLNQRRGFLANQAPHKHGFLEGRHAELCFLDVIPFWKLDLDQDYRVTCFTSWSPCFSCAQEMAKFISKNKHVSLCIKTARIYDDQGRAQEGLRTLAEAGAKISIMTYSEFKHCWDTFVDHQGAPFQPWDGLDEHSQDLSGRLRAILQNQEN
Protection of telomeres protein 1, DNA dC->dU-editing enzyme APOBEC-3G fusion G 361 Homo Sapiens , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) , Synthetic Construct MVIDSLQLNELLNAGEYKIGELTFQSIRSSQELQKKNTIVNLFGIVKDFTPSRQSLHGTKDWVTTVYLWDPTCDTSSIGLQIHLFSKQGNDLPVIKQVGQPLLLHQITLRSYRDRTQGLSKDQFRYALWPDFSSNSKDTLCPQPMPRLMKTGDKEEQFALLLNKIWDEQTNHSMDPPTFTFNFNNEPWVRGRHETYLCYEVERMHNDTWVKLNQRRGFLANQAPHKHGFLEGRHAELCFLDVIPFWKLDLDQDYRVTCFTSWSPCFSCAQEMAKFISKNKHVSLCIKTARIYDDQGRAQEGLRTLAEAGAKISIMTYSEFKHCWDTFVDHQGAPFQPWDGLDEHSQDLSGRLRAILQNQEN
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-12-15
Deposition Author(s): Buzovetsky, O. , Ziegler, S.J.