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FASTA Sequence PDB Format mmCIF Format
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6BKG

Human ligiv catalytic domain with bound dna-adenylate intermediate in closed conformation

PDB DOI: 10.2210/pdb6bkg/pdb

Classification: LIGASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2017-11-08
Deposition Author(s): Bebenek, B. , Kunkel, T.A. , Moon, A.F. , Pedersen, L.C. , Schellenberg, M.J. , Tumbale, P.P. , Williams, J.G. , Williams, R.S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.402 Å

6bkg
Literature

Human ligiv catalytic domain with bound dna-adenylate intermediate in closed conformation

Bebenek, B. , Kunkel, T.A. , Moon, A.F. , Pedersen, L.C. , Schellenberg, M.J. , Tumbale, P.P. , Williams, J.G. , Williams, R.S.

Primary Citation of Related Structures: 6BKG


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA ligase 4 A 621 Homo Sapiens , Synthetic Construct TMAASQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFREFLDSWRKFHDALHKNHKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHGDAGDFAMIAYFVLKPRCLQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLITQSSALEQKWLIRMIIKDLKLGVSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAAIADIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGASPTEGSLTPFIHNAFKADIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMVEDSDLQTCYCVFDVLMVNNKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQAHTKNEVIDALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWKPFHRKAPPSSILCGTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKTGCTLRFPRIEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYIGGD

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*TP*C)-3') p 11 NA GCTGATGCGTC
DNA (5'-D(*GP*TP*CP*CP*GP*AP*CP*GP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') t 18 NA GTCCGACGACGCATCAGC
DNA (5'-D(P*(AMP)P*GP*TP*CP*GP*GP*AP*C)-3') d 7 NA GTCGGAC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-11-08
Deposition Author(s): Bebenek, B. , Kunkel, T.A. , Moon, A.F. , Pedersen, L.C. , Schellenberg, M.J. , Tumbale, P.P. , Williams, J.G. , Williams, R.S.