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6BCH

I-ltri e29d bound to cognate substrate (nicked complex)

PDB DOI: 10.2210/pdb6bch/pdb

Classification: HYDROLASE/DNA
Organism(s): Leptographium Truncatum , Synthetic Construct

Deposited: 2017-10-20
Deposition Author(s): Brown, C. , Edgell, D.R. , Gloor, G.B. , Junop, M. , Mcmurrough, T.A. , Zhang, K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3 Å

6bch
Literature

I-ltri e29d bound to cognate substrate (nicked complex)

Brown, C. , Edgell, D.R. , Gloor, G.B. , Junop, M. , Mcmurrough, T.A. , Zhang, K.

Primary Citation of Related Structures: 6BCH


Proteins
Molecule Chains Sequence Length Organism Sequence
Ribosomal protein 3/homing endonuclease-like fusion protein A 315 Leptographium Truncatum , Synthetic Construct SYSTLANFPVQARNDNISPWTITGFADADSSFMLTVSKDSKRNTGWSVRPRFRIGLHNKDVTILKSIREYLGAGIITSDIDARIRFESLKELEVVINHFDKYPLITQKRADYLLFKKAFYLIKNKEHLTEEGLNQILTLKASLNLGLSEELKEAFPNTIPAERLLVTGQEIPDSNWVAGFTAGEGSFYIRIAKNSTLKTGYQVQSVFQITQDTRDIELMKNLISYLNCGNIRIRKYKGSEGIHDTCVDLVVTNLNDIKEKIIPFFNKNHIIGVKLQDYRDWCKVVTLIDNKEHLTSEGLEKIQKIKEGMNRGRSL
Ribosomal protein 3/homing endonuclease-like fusion protein D 315 Leptographium Truncatum , Synthetic Construct SYSTLANFPVQARNDNISPWTITGFADADSSFMLTVSKDSKRNTGWSVRPRFRIGLHNKDVTILKSIREYLGAGIITSDIDARIRFESLKELEVVINHFDKYPLITQKRADYLLFKKAFYLIKNKEHLTEEGLNQILTLKASLNLGLSEELKEAFPNTIPAERLLVTGQEIPDSNWVAGFTAGEGSFYIRIAKNSTLKTGYQVQSVFQITQDTRDIELMKNLISYLNCGNIRIRKYKGSEGIHDTCVDLVVTNLNDIKEKIIPFFNKNHIIGVKLQDYRDWCKVVTLIDNKEHLTSEGLEKIQKIKEGMNRGRSL
Ribosomal protein 3/homing endonuclease-like fusion protein H 315 Leptographium Truncatum , Synthetic Construct SYSTLANFPVQARNDNISPWTITGFADADSSFMLTVSKDSKRNTGWSVRPRFRIGLHNKDVTILKSIREYLGAGIITSDIDARIRFESLKELEVVINHFDKYPLITQKRADYLLFKKAFYLIKNKEHLTEEGLNQILTLKASLNLGLSEELKEAFPNTIPAERLLVTGQEIPDSNWVAGFTAGEGSFYIRIAKNSTLKTGYQVQSVFQITQDTRDIELMKNLISYLNCGNIRIRKYKGSEGIHDTCVDLVVTNLNDIKEKIIPFFNKNHIIGVKLQDYRDWCKVVTLIDNKEHLTSEGLEKIQKIKEGMNRGRSL
Ribosomal protein 3/homing endonuclease-like fusion protein L 315 Leptographium Truncatum , Synthetic Construct SYSTLANFPVQARNDNISPWTITGFADADSSFMLTVSKDSKRNTGWSVRPRFRIGLHNKDVTILKSIREYLGAGIITSDIDARIRFESLKELEVVINHFDKYPLITQKRADYLLFKKAFYLIKNKEHLTEEGLNQILTLKASLNLGLSEELKEAFPNTIPAERLLVTGQEIPDSNWVAGFTAGEGSFYIRIAKNSTLKTGYQVQSVFQITQDTRDIELMKNLISYLNCGNIRIRKYKGSEGIHDTCVDLVVTNLNDIKEKIIPFFNKNHIIGVKLQDYRDWCKVVTLIDNKEHLTSEGLEKIQKIKEGMNRGRSL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*GP*TP*CP*TP*AP*AP*AP*CP*GP*TP*CP*GP*TP*AP*T)-3') b 16 NA GGTCTAAACGTCGTAT
DNA (5'-D(*GP*GP*TP*CP*TP*AP*AP*AP*CP*GP*TP*CP*GP*TP*AP*T)-3') e 16 NA GGTCTAAACGTCGTAT
DNA (5'-D(*GP*GP*TP*CP*TP*AP*AP*AP*CP*GP*TP*CP*GP*TP*AP*T)-3') i 16 NA GGTCTAAACGTCGTAT
DNA (5'-D(*GP*GP*TP*CP*TP*AP*AP*AP*CP*GP*TP*CP*GP*TP*AP*T)-3') n 16 NA GGTCTAAACGTCGTAT
DNA (26-MER) c 26 NA CAAATGCTCCTATACGACGTTTAGAC
DNA (26-MER) f 26 NA CAAATGCTCCTATACGACGTTTAGAC
DNA (26-MER) j 26 NA CAAATGCTCCTATACGACGTTTAGAC
DNA (26-MER) o 26 NA CAAATGCTCCTATACGACGTTTAGAC
DNA (5'-D(*TP*AP*GP*GP*AP*GP*CP*AP*TP*TP*T)-3') x 11 NA TAGGAGCATTT
DNA (5'-D(*TP*AP*GP*GP*AP*GP*CP*AP*TP*TP*T)-3') g 11 NA TAGGAGCATTT
DNA (5'-D(*TP*AP*GP*GP*AP*GP*CP*AP*TP*TP*T)-3') k 11 NA TAGGAGCATTT
DNA (5'-D(*TP*AP*GP*GP*AP*GP*CP*AP*TP*TP*T)-3') p 11 NA TAGGAGCATTT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-10-20
Deposition Author(s): Brown, C. , Edgell, D.R. , Gloor, G.B. , Junop, M. , Mcmurrough, T.A. , Zhang, K.