PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6B14

Crystal structure of spinach rna aptamer in complex with fab bl3-6s97n

PDB DOI: 10.2210/pdb6b14/pdb

Classification: immune system/rna
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2017-09-16
Deposition Author(s): Dasgupta, S. , Piccirilli, J.A. , Shelke, S.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.64 Å

6b14
Literature

Crystal structure of spinach rna aptamer in complex with fab bl3-6s97n

Dasgupta, S. , Piccirilli, J.A. , Shelke, S.A.

Primary Citation of Related Structures: 6B14


Proteins
Molecule Chains Sequence Length Organism Sequence
Heavy chain of Fab BL3-6S97N H 225 Mus Musculus , Synthetic Construct EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
Light chain of Fab BL3-6S97N L 215 Mus Musculus , Synthetic Construct SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPNTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (86-MER) r 83 NA GACGCGACCGAAAUGGUGAAGGACGGGUCCAGUGCGAAACACGCACUGUUGAGUAGAGUGUGAGCUCCGUAACUGGUCGCGUC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-09-16
Deposition Author(s): Dasgupta, S. , Piccirilli, J.A. , Shelke, S.A.