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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

5ZN7

Crystal structure of gh31 alpha-xylosidase from a soil metagenome complexed with xylose

PDB DOI: 10.2210/pdb5zn7/pdb

Classification: HYDROLASE
Organism(s): Soil Metagenome

Deposited: 2018-04-07
Deposition Author(s): Matsuzawa, T. , Nakamichi, Y. , Watanabe, M. , Yaoi, K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.1 Å

5zn7
Literature

Crystal structure of gh31 alpha-xylosidase from a soil metagenome complexed with xylose

Matsuzawa, T. , Nakamichi, Y. , Watanabe, M. , Yaoi, K.

Primary Citation of Related Structures: 5ZN7


Proteins
Molecule Chains Sequence Length Organism Sequence
alpha-xylosidase MeXyl31 A 687 Soil Metagenome MSEFILTSDKLVWTYDGHKLQIEPWGENSLRVRATVAPELNGNDWALLPAKPSTKVKVSEFEDSARIVNGNISAVVNGRGQLSFYNQNGKLLLEEYWRTRFVAGQGEDTSSKYFSPLTHEARELKPIQGGKFELRARFESQPDERIYGLGQYQQPFLNVKGCTMELAQRNSQASVPFMMSSLGYGMLWNNPAIGEVSFANNVTTWMARVTEQLDYWITAADTPAEISQQYAAATGAAPMLPDYAAGFWQCKLRYRTQDELMEVAREYKRRSLPISVIVADFFHWPNQGDWCFDTREWPDPKAMIDELKEMGIELMVSIWPTVDNRTENYKIMKEKGYLVKAERGVPVTMTFLGNTTFFDATHPGARKYVWEQAKKNYHDLGIKIFWLDEAEPEYSVYDFENYRYHLGPVLEVGNIYPRGYAQAFYEGMEEAGQTEIVNLLRCAWAGSQRYGALVWSGDINSTFGALRNQLMAGLNMGIAGIPWWTTDIGGFDGGDINDPAFQELLIRWFQWGVFCPVTRLHGFRQPMEEPAETYRDGIAQCMTGAANEIWSYGEDNYAIMKSCLELRERLRPYVMRVMKAAHDTGAPVMRPLFFDFPDQAEAWQIEDQYMFGPDILVAPVLEAGQRSRKVWLPEGCAWIDLNTGARQNGGQWCDCDAPLEAIPVFIREAAAVQAELSIALEHHHHHH
alpha-xylosidase MeXyl31 B 687 Soil Metagenome MSEFILTSDKLVWTYDGHKLQIEPWGENSLRVRATVAPELNGNDWALLPAKPSTKVKVSEFEDSARIVNGNISAVVNGRGQLSFYNQNGKLLLEEYWRTRFVAGQGEDTSSKYFSPLTHEARELKPIQGGKFELRARFESQPDERIYGLGQYQQPFLNVKGCTMELAQRNSQASVPFMMSSLGYGMLWNNPAIGEVSFANNVTTWMARVTEQLDYWITAADTPAEISQQYAAATGAAPMLPDYAAGFWQCKLRYRTQDELMEVAREYKRRSLPISVIVADFFHWPNQGDWCFDTREWPDPKAMIDELKEMGIELMVSIWPTVDNRTENYKIMKEKGYLVKAERGVPVTMTFLGNTTFFDATHPGARKYVWEQAKKNYHDLGIKIFWLDEAEPEYSVYDFENYRYHLGPVLEVGNIYPRGYAQAFYEGMEEAGQTEIVNLLRCAWAGSQRYGALVWSGDINSTFGALRNQLMAGLNMGIAGIPWWTTDIGGFDGGDINDPAFQELLIRWFQWGVFCPVTRLHGFRQPMEEPAETYRDGIAQCMTGAANEIWSYGEDNYAIMKSCLELRERLRPYVMRVMKAAHDTGAPVMRPLFFDFPDQAEAWQIEDQYMFGPDILVAPVLEAGQRSRKVWLPEGCAWIDLNTGARQNGGQWCDCDAPLEAIPVFIREAAAVQAELSIALEHHHHHH
alpha-xylosidase MeXyl31 C 687 Soil Metagenome MSEFILTSDKLVWTYDGHKLQIEPWGENSLRVRATVAPELNGNDWALLPAKPSTKVKVSEFEDSARIVNGNISAVVNGRGQLSFYNQNGKLLLEEYWRTRFVAGQGEDTSSKYFSPLTHEARELKPIQGGKFELRARFESQPDERIYGLGQYQQPFLNVKGCTMELAQRNSQASVPFMMSSLGYGMLWNNPAIGEVSFANNVTTWMARVTEQLDYWITAADTPAEISQQYAAATGAAPMLPDYAAGFWQCKLRYRTQDELMEVAREYKRRSLPISVIVADFFHWPNQGDWCFDTREWPDPKAMIDELKEMGIELMVSIWPTVDNRTENYKIMKEKGYLVKAERGVPVTMTFLGNTTFFDATHPGARKYVWEQAKKNYHDLGIKIFWLDEAEPEYSVYDFENYRYHLGPVLEVGNIYPRGYAQAFYEGMEEAGQTEIVNLLRCAWAGSQRYGALVWSGDINSTFGALRNQLMAGLNMGIAGIPWWTTDIGGFDGGDINDPAFQELLIRWFQWGVFCPVTRLHGFRQPMEEPAETYRDGIAQCMTGAANEIWSYGEDNYAIMKSCLELRERLRPYVMRVMKAAHDTGAPVMRPLFFDFPDQAEAWQIEDQYMFGPDILVAPVLEAGQRSRKVWLPEGCAWIDLNTGARQNGGQWCDCDAPLEAIPVFIREAAAVQAELSIALEHHHHHH
alpha-xylosidase MeXyl31 D 687 Soil Metagenome MSEFILTSDKLVWTYDGHKLQIEPWGENSLRVRATVAPELNGNDWALLPAKPSTKVKVSEFEDSARIVNGNISAVVNGRGQLSFYNQNGKLLLEEYWRTRFVAGQGEDTSSKYFSPLTHEARELKPIQGGKFELRARFESQPDERIYGLGQYQQPFLNVKGCTMELAQRNSQASVPFMMSSLGYGMLWNNPAIGEVSFANNVTTWMARVTEQLDYWITAADTPAEISQQYAAATGAAPMLPDYAAGFWQCKLRYRTQDELMEVAREYKRRSLPISVIVADFFHWPNQGDWCFDTREWPDPKAMIDELKEMGIELMVSIWPTVDNRTENYKIMKEKGYLVKAERGVPVTMTFLGNTTFFDATHPGARKYVWEQAKKNYHDLGIKIFWLDEAEPEYSVYDFENYRYHLGPVLEVGNIYPRGYAQAFYEGMEEAGQTEIVNLLRCAWAGSQRYGALVWSGDINSTFGALRNQLMAGLNMGIAGIPWWTTDIGGFDGGDINDPAFQELLIRWFQWGVFCPVTRLHGFRQPMEEPAETYRDGIAQCMTGAANEIWSYGEDNYAIMKSCLELRERLRPYVMRVMKAAHDTGAPVMRPLFFDFPDQAEAWQIEDQYMFGPDILVAPVLEAGQRSRKVWLPEGCAWIDLNTGARQNGGQWCDCDAPLEAIPVFIREAAAVQAELSIALEHHHHHH
alpha-xylosidase MeXyl31 E 687 Soil Metagenome MSEFILTSDKLVWTYDGHKLQIEPWGENSLRVRATVAPELNGNDWALLPAKPSTKVKVSEFEDSARIVNGNISAVVNGRGQLSFYNQNGKLLLEEYWRTRFVAGQGEDTSSKYFSPLTHEARELKPIQGGKFELRARFESQPDERIYGLGQYQQPFLNVKGCTMELAQRNSQASVPFMMSSLGYGMLWNNPAIGEVSFANNVTTWMARVTEQLDYWITAADTPAEISQQYAAATGAAPMLPDYAAGFWQCKLRYRTQDELMEVAREYKRRSLPISVIVADFFHWPNQGDWCFDTREWPDPKAMIDELKEMGIELMVSIWPTVDNRTENYKIMKEKGYLVKAERGVPVTMTFLGNTTFFDATHPGARKYVWEQAKKNYHDLGIKIFWLDEAEPEYSVYDFENYRYHLGPVLEVGNIYPRGYAQAFYEGMEEAGQTEIVNLLRCAWAGSQRYGALVWSGDINSTFGALRNQLMAGLNMGIAGIPWWTTDIGGFDGGDINDPAFQELLIRWFQWGVFCPVTRLHGFRQPMEEPAETYRDGIAQCMTGAANEIWSYGEDNYAIMKSCLELRERLRPYVMRVMKAAHDTGAPVMRPLFFDFPDQAEAWQIEDQYMFGPDILVAPVLEAGQRSRKVWLPEGCAWIDLNTGARQNGGQWCDCDAPLEAIPVFIREAAAVQAELSIALEHHHHHH
alpha-xylosidase MeXyl31 F 687 Soil Metagenome MSEFILTSDKLVWTYDGHKLQIEPWGENSLRVRATVAPELNGNDWALLPAKPSTKVKVSEFEDSARIVNGNISAVVNGRGQLSFYNQNGKLLLEEYWRTRFVAGQGEDTSSKYFSPLTHEARELKPIQGGKFELRARFESQPDERIYGLGQYQQPFLNVKGCTMELAQRNSQASVPFMMSSLGYGMLWNNPAIGEVSFANNVTTWMARVTEQLDYWITAADTPAEISQQYAAATGAAPMLPDYAAGFWQCKLRYRTQDELMEVAREYKRRSLPISVIVADFFHWPNQGDWCFDTREWPDPKAMIDELKEMGIELMVSIWPTVDNRTENYKIMKEKGYLVKAERGVPVTMTFLGNTTFFDATHPGARKYVWEQAKKNYHDLGIKIFWLDEAEPEYSVYDFENYRYHLGPVLEVGNIYPRGYAQAFYEGMEEAGQTEIVNLLRCAWAGSQRYGALVWSGDINSTFGALRNQLMAGLNMGIAGIPWWTTDIGGFDGGDINDPAFQELLIRWFQWGVFCPVTRLHGFRQPMEEPAETYRDGIAQCMTGAANEIWSYGEDNYAIMKSCLELRERLRPYVMRVMKAAHDTGAPVMRPLFFDFPDQAEAWQIEDQYMFGPDILVAPVLEAGQRSRKVWLPEGCAWIDLNTGARQNGGQWCDCDAPLEAIPVFIREAAAVQAELSIALEHHHHHH
alpha-xylosidase MeXyl31 H 687 Soil Metagenome MSEFILTSDKLVWTYDGHKLQIEPWGENSLRVRATVAPELNGNDWALLPAKPSTKVKVSEFEDSARIVNGNISAVVNGRGQLSFYNQNGKLLLEEYWRTRFVAGQGEDTSSKYFSPLTHEARELKPIQGGKFELRARFESQPDERIYGLGQYQQPFLNVKGCTMELAQRNSQASVPFMMSSLGYGMLWNNPAIGEVSFANNVTTWMARVTEQLDYWITAADTPAEISQQYAAATGAAPMLPDYAAGFWQCKLRYRTQDELMEVAREYKRRSLPISVIVADFFHWPNQGDWCFDTREWPDPKAMIDELKEMGIELMVSIWPTVDNRTENYKIMKEKGYLVKAERGVPVTMTFLGNTTFFDATHPGARKYVWEQAKKNYHDLGIKIFWLDEAEPEYSVYDFENYRYHLGPVLEVGNIYPRGYAQAFYEGMEEAGQTEIVNLLRCAWAGSQRYGALVWSGDINSTFGALRNQLMAGLNMGIAGIPWWTTDIGGFDGGDINDPAFQELLIRWFQWGVFCPVTRLHGFRQPMEEPAETYRDGIAQCMTGAANEIWSYGEDNYAIMKSCLELRERLRPYVMRVMKAAHDTGAPVMRPLFFDFPDQAEAWQIEDQYMFGPDILVAPVLEAGQRSRKVWLPEGCAWIDLNTGARQNGGQWCDCDAPLEAIPVFIREAAAVQAELSIALEHHHHHH
alpha-xylosidase MeXyl31 G 687 Soil Metagenome MSEFILTSDKLVWTYDGHKLQIEPWGENSLRVRATVAPELNGNDWALLPAKPSTKVKVSEFEDSARIVNGNISAVVNGRGQLSFYNQNGKLLLEEYWRTRFVAGQGEDTSSKYFSPLTHEARELKPIQGGKFELRARFESQPDERIYGLGQYQQPFLNVKGCTMELAQRNSQASVPFMMSSLGYGMLWNNPAIGEVSFANNVTTWMARVTEQLDYWITAADTPAEISQQYAAATGAAPMLPDYAAGFWQCKLRYRTQDELMEVAREYKRRSLPISVIVADFFHWPNQGDWCFDTREWPDPKAMIDELKEMGIELMVSIWPTVDNRTENYKIMKEKGYLVKAERGVPVTMTFLGNTTFFDATHPGARKYVWEQAKKNYHDLGIKIFWLDEAEPEYSVYDFENYRYHLGPVLEVGNIYPRGYAQAFYEGMEEAGQTEIVNLLRCAWAGSQRYGALVWSGDINSTFGALRNQLMAGLNMGIAGIPWWTTDIGGFDGGDINDPAFQELLIRWFQWGVFCPVTRLHGFRQPMEEPAETYRDGIAQCMTGAANEIWSYGEDNYAIMKSCLELRERLRPYVMRVMKAAHDTGAPVMRPLFFDFPDQAEAWQIEDQYMFGPDILVAPVLEAGQRSRKVWLPEGCAWIDLNTGARQNGGQWCDCDAPLEAIPVFIREAAAVQAELSIALEHHHHHH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2018-04-07
Deposition Author(s): Matsuzawa, T. , Nakamichi, Y. , Watanabe, M. , Yaoi, K.