5ZGH
Cryo-em structure of the red algal psi-lhcr
PDB DOI: 10.2210/pdb5zgh/pdb
Classification: PHOTOSYNTHESIS Organism(s): Cyanidioschyzon Merolae (Strain 10D)
Deposited: 2018-03-09 Deposition Author(s): Pi, X.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.82 Å
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Lhcr1 | 1 | 175 | Cyanidioschyzon Merolae (Strain 10D) | EQSPALPFLSKPPNLSPDMPGYRGFDPLRFSDAFDVNWLQEGEIKNGRVAMLACLHFFVTEFYQFPFFAGAPKLAGPAHDYFVKSGAMIQILAFIGFLEFLLHRGKVLYSDMEWKGRKPGELGFNPLNLPNDKAMRDREVNNGRLAMLGFAGIIHGEFLNGKMPFEQITNFQPLQ |
| PsaI | I | 32 | Cyanidioschyzon Merolae (Strain 10D) | MSASYLPSILVPTVGLILPFASMAILFIAIEK |
| PsaJ | J | 38 | Cyanidioschyzon Merolae (Strain 10D) | MNLKKYLSTAPVVATLWLFLTAGILIELNRFFPDSLFY |
| PsaK | K | 60 | Cyanidioschyzon Merolae (Strain 10D) | MMITIPYTIPTIMVISNLVGVAVGRYALGRSDLTQLIASMCFGHIIGVGIVLGLSNMGVI |
| PsaL | L | 140 | Cyanidioschyzon Merolae (Strain 10D) | MTDYIKPYNNDPFVGHLATPINSSSLTRAYLSQLPIYRRGVSPFLRGLEIGMAHGYFLIGPFVQLGPLRNTDIKYLAGLLSAIGLIVILTLGMLLYGAVSFTNDSQDLESVDGWRQLASGFLLGAVGGAGFAYLLLTLFS |
| PsaM | M | 29 | Cyanidioschyzon Merolae (Strain 10D) | MITDNQVFVALIMALVCGYLAVKLAKQLA |
| PsaO | O | 155 | Cyanidioschyzon Merolae (Strain 10D) | MYGFVSVLPVASALQRQQCTCAARCSFTTRAARVAPVRIALSRPQRLVGASSLRMFEVSDGEPYPLNPAVIFIALIGWSAVAAIPSNIPVLGGTGLTQAFLASIQRLLAQYPTGPKLDDPFWFYLIVYHVGLFALLIFGQIGYAGYAKGTYNRSA |
| Lhcr2 | 2 | 199 | Cyanidioschyzon Merolae (Strain 10D) | TRVPARGLRMQAPSGATMPSMPFLKRPSKLDGSLPGGEGCFDPLGFTEVFSLEWLREAEIKHCRVAMLAVLGVIAQEFGTFDFYNAKSKLQLSPDLHNQFVQNGALQQILLFVCAWEFIVGLPALIESVNGNREPGYFGFDPLKLGGTVGSAQWKRMQAGELRNGRLAMIAFGGFFHQQLLTKQGIIEQLAHFNAIKPN |
| Lhcr3 | 3 | 188 | Cyanidioschyzon Merolae (Strain 10D) | TNVARSSGNSRSVPFAPVPEAVRESGLAGSEAEFDPLMITSYLPISWMRESEVKHGRIAMLAFVGTLAQQAYQFPWYKGAPTTLVGAHDHFVTTALAQILLFTSAFEIVAGVPAAIQTVRGSGRLPGYYGFDPLGLWGKDEASRKRMELAEVKNGRLAMIAMLALWHQEVLSGGMGVIEQLVKQKFTP |
| PsaA | A | 748 | Cyanidioschyzon Merolae (Strain 10D) | MTLTTEKQVKVVVDRDVVPTSFEKWAKPGHFSRSLAKGPKTTTWIWNLHADAHDFDSHTSSLEEVSRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYVAWLSNPTGIKPSAQVVWPIVGQQILNADVGGGMQGIQITSGLFQLWRASGIVNELQLYVTALGGLGMAGLMIFAGWFHYHKAAPKLEWFQNVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINKLLDAGVAPSSIPLPHEFILNRNLMAELYPSFQQGLVPFFTLNWKQYSDILTFKGGLSPVTGGLWLTDVAHHHLAIAVLFLVAGHMYRTNWGIGHSIKQILEAHKGPLTGEGHKGLYEILTTSWHANLAINLAMLGSLSIIVAHHMYAMPPYPYLATDYPTQLSLFTHHMWIGGFCIVGAGAHAAIYMVRDYSPTVNFNNVLDRMIRHRDAIISHLNWVCIFLGMHSFGLYIHNDTMRALGRAQDMFSDTAIQLQPVFAQWIQQIHTLAPGNTAVNALATASYAFGADTVTVGSKIAMMPIKLGTADFMVHHIHAFTIHVTTLILLKGVLYARNSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNALSIVIFHFSWKMQSDVWGTVTSNGAISHITGGNFAQSAITINGWLRDFLWAQASQVIQSYGSSLSAYGLMFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIAPRALSITQGRAVGVAHYLLGGIATTWAFFLARIIAVG |
| PsaB | B | 732 | Cyanidioschyzon Merolae (Strain 10D) | MATKFPKFSQALASDPTTRRIWYGIATAHDFESHDGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWVANPLKTKPLAHAIWDPHFGQAALKAFTRGDTVANISYSGVYHWWYTIGIRNNVELYTGALGLLVLSAVFLLAGWLHIQPKFKPSLSWFKNNESRLNHHLAGLFGVSSLAWTGHLVHVAIPASRGQHVGWDNFIMTPPHPAGLQPFFTGNWSVYAQSPDSMQHVFGTSQGAGTAILTFLGGFHPQTQSLWLTDMAHHHLAIAVIFIVAGHMYRTNFGIGHNLKTILEAHRPPSGRLGKGHIGIYQTLTNSLHFQLGLALASLSVVTSLVAQHMYAMPPYAYMAFDYVTQSALYTHHQYIAGLLIVGAFAHGAIFFIRDYDPEQNQDNVLARMLAHKEAVISHLSWVSLFLGFHTLGLYVHNDVVVAFGNPEKQILIEPIFAQWIQATSGKMLYGFQVLLSSSTSNASVAAQQLWLPGWLEAVNNESNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLAMFWMLNTIGWVTFYWHWKHLSLWQGNVAQFNESSTYLMGWLRDYLWLNSSPLINGYNPYGMNSLAVWSWMFLFAHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWKDKPVALSIVQARLVGLVHFTVGYILTYAAFVIASTAGKFS |
| PsaC | C | 81 | Cyanidioschyzon Merolae (Strain 10D) | MAHTVKIYDNCIGCTQCVRACPLDVLEMVPWDGCKAGQMASAPRTEDCVGCKRCETACPTDFLSIRVYLGGETTRSMGLAY |
| PsaD | D | 139 | Cyanidioschyzon Merolae (Strain 10D) | MLNLKMPSPSFLGSTGGWLRCAETEEKYAMTWSSDQQHIFEMPTGGAAVMNSGDNLLYLARKEQALALATQLRTQFKIQDYKIYRIFPSGEVQYLHPKDGVLPYQVNKGREQVGRVKSTIGKNVNPAQVKFTSKATYDR |
| PsaE | E | 94 | Cyanidioschyzon Merolae (Strain 10D) | MIKKGSLVKILRPESFWYNEVGTVVNVETSKVLYPVLVRFDKVNYSGLNSTNFSLDELVEIKVEIKSDTSAKSPVKPPVKSEVKAEKENKKEGA |
| PsaF | F | 185 | Cyanidioschyzon Merolae (Strain 10D) | MFKRSLIFIAAVMSVCQISAIQISAVSADVLTPCQQSEAFHKREINEVRTLENRQANYEANSPSYLALQSQIDQVHKRFDKYGTLLCGQDGLPHLITDGDWRHAREFTIPALLFLYITGWIGWVGRSYLKYTKETKNPTEQEIILDVPMALKYMLSGFLWPLSAWQEYRSGQLLAKEDEITVSPR |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2018-03-09 Deposition Author(s): Pi, X.