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5YIV

Caulobacter crescentus gcra dna-binding domain(dbd) in complex with methylated dsdna(crystal form 1)

PDB DOI: 10.2210/pdb5yiv/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Yellowtail Ascites Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2017-10-06
Deposition Author(s): Wu, X. , Zhang, Y.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.914 Å

5yiv
Literature

Caulobacter crescentus gcra dna-binding domain(dbd) in complex with methylated dsdna(crystal form 1)

Wu, X. , Zhang, Y.

Primary Citation of Related Structures: 5YIV


Proteins
Molecule Chains Sequence Length Organism Sequence
Cell cycle regulatory protein GcrA A 49 Yellowtail Ascites Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GAMDMSWTDERVSTLKKLWLDGLSASQIAKQLGGVTRNAVIGKVHRLGL
Cell cycle regulatory protein GcrA B 49 Yellowtail Ascites Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GAMDMSWTDERVSTLKKLWLDGLSASQIAKQLGGVTRNAVIGKVHRLGL
Cell cycle regulatory protein GcrA C 49 Yellowtail Ascites Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GAMDMSWTDERVSTLKKLWLDGLSASQIAKQLGGVTRNAVIGKVHRLGL
Cell cycle regulatory protein GcrA D 49 Yellowtail Ascites Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GAMDMSWTDERVSTLKKLWLDGLSASQIAKQLGGVTRNAVIGKVHRLGL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*CP*CP*TP*GP*(6MA)P*TP*TP*CP*G)-3') e 9 NA CCTGATTCG
DNA (5'-D(*CP*CP*TP*GP*(6MA)P*TP*TP*CP*G)-3') g 9 NA CCTGATTCG
DNA (5'-D(*CP*CP*TP*GP*(6MA)P*TP*TP*CP*G)-3') i 9 NA CCTGATTCG
DNA (5'-D(*CP*CP*TP*GP*(6MA)P*TP*TP*CP*G)-3') k 9 NA CCTGATTCG
DNA (5'-D(*CP*CP*GP*(6MA)P*AP*TP*CP*AP*G)-3') f 9 NA CCGAATCAG
DNA (5'-D(*CP*CP*GP*(6MA)P*AP*TP*CP*AP*G)-3') h 9 NA CCGAATCAG
DNA (5'-D(*CP*CP*GP*(6MA)P*AP*TP*CP*AP*G)-3') j 9 NA CCGAATCAG
DNA (5'-D(*CP*CP*GP*(6MA)P*AP*TP*CP*AP*G)-3') l 9 NA CCGAATCAG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-10-06
Deposition Author(s): Wu, X. , Zhang, Y.