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FASTA Sequence PDB Format mmCIF Format
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5XNL

Structure of stacked c2s2m2-type psii-lhcii supercomplex from pisum sativum

PDB DOI: 10.2210/pdb5xnl/pdb

Classification: MEMBRANE PROTEIN
Organism(s): Pisum Sativum

Deposited: 2017-05-23
Deposition Author(s): Cao, P. , Chang, W.R. , Li, M. , Liu, Z.F. , Ma, J. , Su, X.D. , Wei, X.P. , Zhang, X.Z. , Zhu, D.J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.7 Å

5xnl
Literature

Structure of stacked c2s2m2-type psii-lhcii supercomplex from pisum sativum

Cao, P. , Chang, W.R. , Li, M. , Liu, Z.F. , Ma, J. , Su, X.D. , Wei, X.P. , Zhang, X.Z. , Zhu, D.J.

Primary Citation of Related Structures: 5XNL


Proteins
Molecule Chains Sequence Length Organism Sequence
Chlorophyll a-b binding protein 8, chloroplastic 1 232 Pisum Sativum RKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK
Chlorophyll a-b binding protein 8, chloroplastic 2 232 Pisum Sativum RKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK
Chlorophyll a-b binding protein 8, chloroplastic G 232 Pisum Sativum RKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK
Chlorophyll a-b binding protein 8, chloroplastic N 232 Pisum Sativum RKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK
Chlorophyll a-b binding protein 8, chloroplastic Y 232 Pisum Sativum RKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK
Chlorophyll a-b binding protein 8, chloroplastic 5 232 Pisum Sativum RKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK
Chlorophyll a-b binding protein 8, chloroplastic 6 232 Pisum Sativum RKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK
Photosystem II reaction center protein H H 73 Pisum Sativum MATQTVENSSRSGPRRTAVGDLLKPLNSEYGKVAPGWGTTPLMGIAMALFAVFLSIILEIYNSSLLLDQISMN
Photosystem II reaction center protein I, PsbI I 36 Pisum Sativum MLTLKLFVYTIVIFFVSLFIFGFLSNDPGRNPGREE
Photosystem II reaction center protein J J 40 Pisum Sativum MANTTGRIPLWIIGTVAGIVVIGLIGLFFYGSYSGLGSSL
Photosystem II reaction center protein K K 61 Pisum Sativum MLNIFSLVCICINSALYSSSFFLGKLPEAYAFLNPIVDFMPVIPLLFFLLAFVWQAAVSFR
Photosystem II reaction center protein L L 38 Pisum Sativum MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Photosystem II reaction center protein M M 34 Pisum Sativum MEVNILAFIATALFILVPTAFLLIIYVKTVSQSD
Oxygen-evolving enhancer protein 1, chloroplastic O 248 Pisum Sativum EGAPKRLTFDEIQSKTYLEVKGTGTANQCPTIDGGVDSFSFKPGKYNAKKLCLEPTSFTVKSEGVTKNTPLAFQNTKLMTRLTYTLDEIEGPFEVSADGSVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPDSFSGEFLVPSYRGSSFLDPKGRGASTGYDNAVALPAGGRGDEEELGKENNKSAASSKGKITLSVTQTKPETGEVIGVFESIQPSDTDLGAKAPKDVKIQGVWYAQLES
Oxygen-evolving enhancer protein 2, chloroplastic P 186 Pisum Sativum AYGEAANVFGKAKTNTDYLPYNGDGFKLLVPAKWNPSKEREFPGQVLRYEDNFDATSNVSVLVQTTDKKSITDYGSPEEFLSKVDYLLGKQAFFGQTDSEGGFDTNAVAVANILESSAPVIGGKQYYNISVLTRTADGDEGGKHQLITATVKDGKLYICKAQAGDKRWFKGARKFVEDTASSFSVA
Oxygen-evolving enhancer protein 3 Q 148 Pisum Sativum EAIPIKVGGPPPLSGGLPGTLNSDEARDLKLPLKERFFIQPLAPTEAAARTKESAKEIVAAKKFIDQKAWPFLQNDLRLRAGYLRYDLKTIISSKPKDQKQSLKELTDKLFQDISNLDHAAKIKSPSEAEKYYAIAVSTLNDVLSKIA
Light harvesting chlorophyll a/b-binding protein Lhcb4, CP29 R 246 Pisum Sativum KPSRSAPTTDRPLWFPGAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTRTEFEDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSTYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS
Chlorophyll a-b binding protein, chloroplastic 3 243 Pisum Sativum RKSANPLRDVVAMGTSKFTMGNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQIVLMGLVEGFRINGLPDVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGA
Chlorophyll a-b binding protein, chloroplastic 7 243 Pisum Sativum RKSANPLRDVVAMGTSKFTMGNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQIVLMGLVEGFRINGLPDVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGA
Light harvesting chlorophyll a/b-binding protein Lhcb5, CP26 S 244 Pisum Sativum ALFSKKKAAPPKKAVVSPVDDELAKWYGPDRRIFLPEGLLDRSEIPAYLTGEVPGDYGYDPFGLSKKPDDFAKYQAYELIHGRWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLIFAVIAEVVLVGGAEYYRIINGLNLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFANNLLTVLAGSAERAPTL
Photosystem II reaction center protein T T 35 Pisum Sativum MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKNTK
Photosystem II reaction center protein W W 54 Pisum Sativum LVDDRMSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFIYASGLDEDEESGLSL
Photosystem II reaction center protein X X 86 Pisum Sativum SIGRASSKSNGRFQVKASLKEKVVTGLTAAALTAQMVIPDVAEAATVSPSLKNFLLSIVSGGVVVTAILGAVIGVSNFDPVKRGSQ
Photosystem II reaction center protein Z Z 62 Pisum Sativum MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSSNKNVVFSGTSLWIGLVFLVGILNSLIS
Light harvesting chlorophyll a/b-binding protein Lhcb6, CP24 4 210 Pisum Sativum AASAPKKSWIPGVSFGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGADPNAIAPFSFGTLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSKTAENFVNSTGEQGYPGGKFFDPLSLAGTIENGVYIPDTDKLERLKLAEIKHARLAMLAMLIFYFEAGQGKTPLGALGL
Light harvesting chlorophyll a/b-binding protein Lhcb6, CP24 8 210 Pisum Sativum AASAPKKSWIPGVSFGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGADPNAIAPFSFGTLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSKTAENFVNSTGEQGYPGGKFFDPLSLAGTIENGVYIPDTDKLERLKLAEIKHARLAMLAMLIFYFEAGQGKTPLGALGL
Photosystem II protein D1 A 344 Pisum Sativum MTAILERRDSENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA
Photosystem II CP47 reaction center protein B 507 Pisum Sativum MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWLYWDLEIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQSVNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGHVENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRGDVPFRRAESKYSVEQVGVIVEFYGGELNGVTYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDLFAGIDPDLDAQVEFGAFQKLGDPTTRRGL
Photosystem II CP43 reaction center protein C 473 Pisum Sativum MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGSFLLVFKAFYFGGIYDTWAPGGGDVRKITNFTLSPSILFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALAVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Photosystem II D2 protein D 353 Pisum Sativum MTIALGKFTKDQNDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDLTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMATQDQPHENLIFPEEVLPRGNAL
Cytochrome b559 subunit alpha E 83 Pisum Sativum MSGSTGERSFADIITSIRYWIIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTETRQGIPLITGRFDSLEQLDEFSRSF
Cytochrome b559 subunit beta, PsbF F 39 Pisum Sativum MTIDRTYPIFTVRWLAVHGLAVPTVFFLGSISAMQFIQR
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2017-05-23
Deposition Author(s): Cao, P. , Chang, W.R. , Li, M. , Liu, Z.F. , Ma, J. , Su, X.D. , Wei, X.P. , Zhang, X.Z. , Zhu, D.J.