Crystal structure of quinol:fumarate reductase from desulfovibrio gigas
PDB DOI: 10.2210/pdb5xmj/pdb
Classification: ELECTRON TRANSPORT Organism(s): Desulfovibrio Gigas , Desulfovibrio Gigas Dsm 1382 = Atcc 19364
Deposited: 2017-05-15 Deposition Author(s): Chen, C.J. , Guan, H.H. , Hsieh, Y.C. , Lin, P.R.
Crystal structure of quinol:fumarate reductase from desulfovibrio gigas
Chen, C.J. , Guan, H.H. , Hsieh, Y.C. , Lin, P.R.
Primary Citation of Related Structures: 5XMJ
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
fumarate reductase flavoprotein subunit | A | 627 | Desulfovibrio Gigas , Desulfovibrio Gigas Dsm 1382 = Atcc 19364 | MQIYHTDVLCIGGALAGERVAVEASMAGLKTIMLSLVPPRRSHSSAAQGGMQAALGNAIMGDGDSPDVHFADTVKGSDWGCDQEVARIFADTAPIVMREVAHWGVPWNRVVPGKHTYYKGGKPFEAEEKAEKAGLIHARAFGGTAAWRTCYTADGTGRSVLNTLDTKCLQYGVTVHDRMQAEALIHDGGNCLGCIARCLRTGELVAYLATSTLIATGGYGRIYKATTNAVICDGGGQIIALDTGLVPMGNMEAVQFHPTGTVPTDILVTEGCRGDGGTLLDVNQYRFMPDYEPDKAQLASRDVVSRRMTEHMRKGLGVKSPYGDHLWLDIRHLGEKHITTKLREVYDICTNFLGVNPIHQLIPVRPTHHYSMGGVRTNRDGAAYGLKGLFSAGESACWDMHGFNRLGGNSLAETVVAGRYIGERMVEFTKGATPSFGMQYVEDAHKKVQERITDIVTGRKGKENTFKIRDEMHDIMMEGVGIFRNGTDLQKAVNKLEELYDRSQKISLSSACKGMNPELSTALRIRGMLKLAQCTAYGALDRTESRGAHTREDFPERNDKEWLNRTLSYWKEGASMPTLEYEEASPYYEMPPGDRGYGGGVTIANELPPEKFVIPEAAKENLKKAKL |
fumarate reductase flavoprotein subunit | E | 627 | Desulfovibrio Gigas , Desulfovibrio Gigas Dsm 1382 = Atcc 19364 | MQIYHTDVLCIGGALAGERVAVEASMAGLKTIMLSLVPPRRSHSSAAQGGMQAALGNAIMGDGDSPDVHFADTVKGSDWGCDQEVARIFADTAPIVMREVAHWGVPWNRVVPGKHTYYKGGKPFEAEEKAEKAGLIHARAFGGTAAWRTCYTADGTGRSVLNTLDTKCLQYGVTVHDRMQAEALIHDGGNCLGCIARCLRTGELVAYLATSTLIATGGYGRIYKATTNAVICDGGGQIIALDTGLVPMGNMEAVQFHPTGTVPTDILVTEGCRGDGGTLLDVNQYRFMPDYEPDKAQLASRDVVSRRMTEHMRKGLGVKSPYGDHLWLDIRHLGEKHITTKLREVYDICTNFLGVNPIHQLIPVRPTHHYSMGGVRTNRDGAAYGLKGLFSAGESACWDMHGFNRLGGNSLAETVVAGRYIGERMVEFTKGATPSFGMQYVEDAHKKVQERITDIVTGRKGKENTFKIRDEMHDIMMEGVGIFRNGTDLQKAVNKLEELYDRSQKISLSSACKGMNPELSTALRIRGMLKLAQCTAYGALDRTESRGAHTREDFPERNDKEWLNRTLSYWKEGASMPTLEYEEASPYYEMPPGDRGYGGGVTIANELPPEKFVIPEAAKENLKKAKL |
fumarate reductase flavoprotein subunit | I | 627 | Desulfovibrio Gigas , Desulfovibrio Gigas Dsm 1382 = Atcc 19364 | MQIYHTDVLCIGGALAGERVAVEASMAGLKTIMLSLVPPRRSHSSAAQGGMQAALGNAIMGDGDSPDVHFADTVKGSDWGCDQEVARIFADTAPIVMREVAHWGVPWNRVVPGKHTYYKGGKPFEAEEKAEKAGLIHARAFGGTAAWRTCYTADGTGRSVLNTLDTKCLQYGVTVHDRMQAEALIHDGGNCLGCIARCLRTGELVAYLATSTLIATGGYGRIYKATTNAVICDGGGQIIALDTGLVPMGNMEAVQFHPTGTVPTDILVTEGCRGDGGTLLDVNQYRFMPDYEPDKAQLASRDVVSRRMTEHMRKGLGVKSPYGDHLWLDIRHLGEKHITTKLREVYDICTNFLGVNPIHQLIPVRPTHHYSMGGVRTNRDGAAYGLKGLFSAGESACWDMHGFNRLGGNSLAETVVAGRYIGERMVEFTKGATPSFGMQYVEDAHKKVQERITDIVTGRKGKENTFKIRDEMHDIMMEGVGIFRNGTDLQKAVNKLEELYDRSQKISLSSACKGMNPELSTALRIRGMLKLAQCTAYGALDRTESRGAHTREDFPERNDKEWLNRTLSYWKEGASMPTLEYEEASPYYEMPPGDRGYGGGVTIANELPPEKFVIPEAAKENLKKAKL |
fumarate reductase flavoprotein subunit | M | 627 | Desulfovibrio Gigas , Desulfovibrio Gigas Dsm 1382 = Atcc 19364 | MQIYHTDVLCIGGALAGERVAVEASMAGLKTIMLSLVPPRRSHSSAAQGGMQAALGNAIMGDGDSPDVHFADTVKGSDWGCDQEVARIFADTAPIVMREVAHWGVPWNRVVPGKHTYYKGGKPFEAEEKAEKAGLIHARAFGGTAAWRTCYTADGTGRSVLNTLDTKCLQYGVTVHDRMQAEALIHDGGNCLGCIARCLRTGELVAYLATSTLIATGGYGRIYKATTNAVICDGGGQIIALDTGLVPMGNMEAVQFHPTGTVPTDILVTEGCRGDGGTLLDVNQYRFMPDYEPDKAQLASRDVVSRRMTEHMRKGLGVKSPYGDHLWLDIRHLGEKHITTKLREVYDICTNFLGVNPIHQLIPVRPTHHYSMGGVRTNRDGAAYGLKGLFSAGESACWDMHGFNRLGGNSLAETVVAGRYIGERMVEFTKGATPSFGMQYVEDAHKKVQERITDIVTGRKGKENTFKIRDEMHDIMMEGVGIFRNGTDLQKAVNKLEELYDRSQKISLSSACKGMNPELSTALRIRGMLKLAQCTAYGALDRTESRGAHTREDFPERNDKEWLNRTLSYWKEGASMPTLEYEEASPYYEMPPGDRGYGGGVTIANELPPEKFVIPEAAKENLKKAKL |
Succinate dehydrogenase iron-sulfur subunit | B | 264 | Desulfovibrio Gigas , Desulfovibrio Gigas Dsm 1382 = Atcc 19364 | MNRMLTLNIFRYNPLDPDSQPRMQTFTVQEYDSMTLFIALTQIRDEKDPTLKVDFCCRAGICGSCAMVINGRPGLACHTQTKDLPAEITLHPLPFFQLLGDLSVDTGSWFRKTGLQIEAWCHSDDKAFDPTADEMRMDNDLANEIFELDRCIECGCCVAACGTARMRTDFLGAVSIMRVARFYLDPRDKRSEDDYYDVIGNDQGVFGCMGLLACEDVCPKGIPLQDQLGIMRRMMAMHSVKGVLPRPLIETIKKKGCCHAHAQS |
Succinate dehydrogenase iron-sulfur subunit | F | 264 | Desulfovibrio Gigas , Desulfovibrio Gigas Dsm 1382 = Atcc 19364 | MNRMLTLNIFRYNPLDPDSQPRMQTFTVQEYDSMTLFIALTQIRDEKDPTLKVDFCCRAGICGSCAMVINGRPGLACHTQTKDLPAEITLHPLPFFQLLGDLSVDTGSWFRKTGLQIEAWCHSDDKAFDPTADEMRMDNDLANEIFELDRCIECGCCVAACGTARMRTDFLGAVSIMRVARFYLDPRDKRSEDDYYDVIGNDQGVFGCMGLLACEDVCPKGIPLQDQLGIMRRMMAMHSVKGVLPRPLIETIKKKGCCHAHAQS |
Succinate dehydrogenase iron-sulfur subunit | J | 264 | Desulfovibrio Gigas , Desulfovibrio Gigas Dsm 1382 = Atcc 19364 | MNRMLTLNIFRYNPLDPDSQPRMQTFTVQEYDSMTLFIALTQIRDEKDPTLKVDFCCRAGICGSCAMVINGRPGLACHTQTKDLPAEITLHPLPFFQLLGDLSVDTGSWFRKTGLQIEAWCHSDDKAFDPTADEMRMDNDLANEIFELDRCIECGCCVAACGTARMRTDFLGAVSIMRVARFYLDPRDKRSEDDYYDVIGNDQGVFGCMGLLACEDVCPKGIPLQDQLGIMRRMMAMHSVKGVLPRPLIETIKKKGCCHAHAQS |
Succinate dehydrogenase iron-sulfur subunit | N | 264 | Desulfovibrio Gigas , Desulfovibrio Gigas Dsm 1382 = Atcc 19364 | MNRMLTLNIFRYNPLDPDSQPRMQTFTVQEYDSMTLFIALTQIRDEKDPTLKVDFCCRAGICGSCAMVINGRPGLACHTQTKDLPAEITLHPLPFFQLLGDLSVDTGSWFRKTGLQIEAWCHSDDKAFDPTADEMRMDNDLANEIFELDRCIECGCCVAACGTARMRTDFLGAVSIMRVARFYLDPRDKRSEDDYYDVIGNDQGVFGCMGLLACEDVCPKGIPLQDQLGIMRRMMAMHSVKGVLPRPLIETIKKKGCCHAHAQS |
fumarate reductase respiratory complex | C | 218 | Desulfovibrio Gigas , Desulfovibrio Gigas Dsm 1382 = Atcc 19364 | MNASTITLHVPQRSKIAGRMDFFQMVSGALLILFLWAHMMLVSSVILSPSLMNGIAWFFEATYMAQIGGPAVFVLMVVHFILAARKMPFKQDEWKTFRVHACMLHHKDTTMWVVQVISAIFILVLGAVHMFVVLTDLPITAAKSAARLQSGWLYLYLVLLPLAELHVGVGFYRIGVKYGFVGRNKRKWFQKTENLMMIGFITIGLLTLVRFMLLNIQG |
fumarate reductase respiratory complex | G | 218 | Desulfovibrio Gigas , Desulfovibrio Gigas Dsm 1382 = Atcc 19364 | MNASTITLHVPQRSKIAGRMDFFQMVSGALLILFLWAHMMLVSSVILSPSLMNGIAWFFEATYMAQIGGPAVFVLMVVHFILAARKMPFKQDEWKTFRVHACMLHHKDTTMWVVQVISAIFILVLGAVHMFVVLTDLPITAAKSAARLQSGWLYLYLVLLPLAELHVGVGFYRIGVKYGFVGRNKRKWFQKTENLMMIGFITIGLLTLVRFMLLNIQG |
fumarate reductase respiratory complex | K | 218 | Desulfovibrio Gigas , Desulfovibrio Gigas Dsm 1382 = Atcc 19364 | MNASTITLHVPQRSKIAGRMDFFQMVSGALLILFLWAHMMLVSSVILSPSLMNGIAWFFEATYMAQIGGPAVFVLMVVHFILAARKMPFKQDEWKTFRVHACMLHHKDTTMWVVQVISAIFILVLGAVHMFVVLTDLPITAAKSAARLQSGWLYLYLVLLPLAELHVGVGFYRIGVKYGFVGRNKRKWFQKTENLMMIGFITIGLLTLVRFMLLNIQG |
fumarate reductase respiratory complex | O | 218 | Desulfovibrio Gigas , Desulfovibrio Gigas Dsm 1382 = Atcc 19364 | MNASTITLHVPQRSKIAGRMDFFQMVSGALLILFLWAHMMLVSSVILSPSLMNGIAWFFEATYMAQIGGPAVFVLMVVHFILAARKMPFKQDEWKTFRVHACMLHHKDTTMWVVQVISAIFILVLGAVHMFVVLTDLPITAAKSAARLQSGWLYLYLVLLPLAELHVGVGFYRIGVKYGFVGRNKRKWFQKTENLMMIGFITIGLLTLVRFMLLNIQG |
Method: X-RAY DIFFRACTION
Deposited Date: 2017-05-15 Deposition Author(s): Chen, C.J. , Guan, H.H. , Hsieh, Y.C. , Lin, P.R.