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5X2H

Crystal structure of campylobacter jejuni cas9 in complex with sgrna and target dna (agaaaca pam)

PDB DOI: 10.2210/pdb5x2h/pdb

Classification: HYDROLASE/RNA/DNA
Organism(s): Campylobacter Jejuni Subsp. Jejuni Serotype O:2 (Strain Atcc 700819 / Nctc 11168) , Synthetic Construct

Deposited: 2017-01-31
Deposition Author(s): Hirano, H. , Ishitani, R. , Nakane, T. , Nishimasu, H. , Nureki, O. , Watanabe, Y. , Yamada, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.3 Å

5x2h
Literature

Crystal structure of campylobacter jejuni cas9 in complex with sgrna and target dna (agaaaca pam)

Hirano, H. , Ishitani, R. , Nakane, T. , Nishimasu, H. , Nureki, O. , Watanabe, Y. , Yamada, M.

Primary Citation of Related Structures: 5X2H


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated endonuclease Cas9 A 835 Campylobacter Jejuni Subsp. Jejuni Serotype O:2 (Strain Atcc 700819 / Nctc 11168) , Synthetic Construct SSGSGHMARILAFDIGISSIGWAFSENDELKDCGVRIFTKVENPKTGESLALPRRLARSARKRLARRKARLNHLKHLIANEFKLNYEDYQSFDESLAKAYKGSLISPYELRFRALNELLSKQDFARVILHIAKRRGYDDIKNSDDKEKGAILKAIKQNEEKLANYQSVGEYLYKEYFQKFKENSKEFTNVRNKKESYERCIAQSFLKDELKLIFKKQREFGFSFSKKFEEEVLSVAFYKRALKDFSHLVGNCSFFTDEKRAPKNSPLAFMFVALTRIINLLNNLKNTEGILYTKDDLNALLNEVLKNGTLTYKQTKKLLGLSDDYEFKGEKGTYFIEFKKYKEFIKALGEHNLSQDDLNEIAKDITLIKDEIKLKKALAKYDLNQNQIDSLSKLEFKDHLNISFKALKLVTPLMLEGKKYDEACNELNLKVAINEDKKDFLPAFNETYYKDEVTNPVVLRAIKEYRKVLNALLKKYGKVHKINIELGGGSGGYIARLVLNYTKDYLDFLPLSDDENTKLNDTQKGSKVHVEAKSGMLTSALRHTWGFSAKDRNNHLHHAIDAVIIAYANNSIVKAFSDFKKEQESNSAELYAKKISELDYKNKRKFFEPFSGFRQKVLDKIDEIFVSKPERKKPSGALHEETFRKEEEFYQSYGGKEGVLKALELGKIRKVNGKIVKNGDMFRVDIFKHKKTNKFYAVPIYTMDFALKVLPNKAVARSKKGEIKDWILMDENYEFCFSLYKDSLILIQTKDMQEPEFVYYNAFTSSTVSLIVSKHDNKFETLSKNQKILFKNANEKEVIAKSIGIQNLKVFEKYIVSALGEVTKAEFRQREDFKK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
sgRNA b 93 NA GGAAAUUAGGUGCGCUUGGCGUUUUAGUCCCUGAAAAGGGACUAAAAUAAAGAGUUUGCGGGACUCUGCGGGGUUACAAUCCCCUAAAACCGC
Target DNA strand c 28 NA CTGTTTCTGCCAAGCGCACCTAATTTCC
Non-target DNA strand d 8 NA AGAAACAG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-01-31
Deposition Author(s): Hirano, H. , Ishitani, R. , Nakane, T. , Nishimasu, H. , Nureki, O. , Watanabe, Y. , Yamada, M.