PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

5WDL

A processive dipeptidyl aminopeptidase secreted from an established commensal bacterium p. distasonis

PDB DOI: 10.2210/pdb5wdl/pdb

Classification: HYDROLASE
Organism(s): Parabacteroides Distasonis (Strain Atcc 8503 / Dsm 20701 / Cip 104284 / Jcm 5825 / Nctc 11152)

Deposited: 2017-07-05
Deposition Author(s): Chatterjee, S. , Jiang, Z. , Odonoghue, A.J. , Solania, A. , Wolan, D.W. , Xu, J.H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.625 Å

Literature

A processive dipeptidyl aminopeptidase secreted from an established commensal bacterium p. distasonis

Chatterjee, S. , Jiang, Z. , Odonoghue, A.J. , Solania, A. , Wolan, D.W. , Xu, J.H.

Primary Citation of Related Structures: 5WDL


Proteins
Molecule Chains Sequence Length Organism Sequence
Aminopeptidase C A 401 Parabacteroides Distasonis (Strain Atcc 8503 / Dsm 20701 / Cip 104284 / Jcm 5825 / Nctc 11152) MGSDKIHHHHHHENLYFQQDTEKKVSEEGFVFTTVKENPITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETFGLVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYTPKSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLPLDEFMEVFDNAINTGYTIAWGSDVSESGFTRDGVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEYYMVKNSWGTNSKYNGIWYASKAFVRYKTMNIVVHKDALPKAIKAKLGIK
Aminopeptidase C B 401 Parabacteroides Distasonis (Strain Atcc 8503 / Dsm 20701 / Cip 104284 / Jcm 5825 / Nctc 11152) MGSDKIHHHHHHENLYFQQDTEKKVSEEGFVFTTVKENPITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETFGLVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYTPKSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLPLDEFMEVFDNAINTGYTIAWGSDVSESGFTRDGVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEYYMVKNSWGTNSKYNGIWYASKAFVRYKTMNIVVHKDALPKAIKAKLGIK
Aminopeptidase C C 401 Parabacteroides Distasonis (Strain Atcc 8503 / Dsm 20701 / Cip 104284 / Jcm 5825 / Nctc 11152) MGSDKIHHHHHHENLYFQQDTEKKVSEEGFVFTTVKENPITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETFGLVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYTPKSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLPLDEFMEVFDNAINTGYTIAWGSDVSESGFTRDGVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEYYMVKNSWGTNSKYNGIWYASKAFVRYKTMNIVVHKDALPKAIKAKLGIK
Aminopeptidase C D 401 Parabacteroides Distasonis (Strain Atcc 8503 / Dsm 20701 / Cip 104284 / Jcm 5825 / Nctc 11152) MGSDKIHHHHHHENLYFQQDTEKKVSEEGFVFTTVKENPITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETFGLVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYTPKSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLPLDEFMEVFDNAINTGYTIAWGSDVSESGFTRDGVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEYYMVKNSWGTNSKYNGIWYASKAFVRYKTMNIVVHKDALPKAIKAKLGIK
Aminopeptidase C E 401 Parabacteroides Distasonis (Strain Atcc 8503 / Dsm 20701 / Cip 104284 / Jcm 5825 / Nctc 11152) MGSDKIHHHHHHENLYFQQDTEKKVSEEGFVFTTVKENPITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETFGLVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYTPKSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLPLDEFMEVFDNAINTGYTIAWGSDVSESGFTRDGVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEYYMVKNSWGTNSKYNGIWYASKAFVRYKTMNIVVHKDALPKAIKAKLGIK
Aminopeptidase C F 401 Parabacteroides Distasonis (Strain Atcc 8503 / Dsm 20701 / Cip 104284 / Jcm 5825 / Nctc 11152) MGSDKIHHHHHHENLYFQQDTEKKVSEEGFVFTTVKENPITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETFGLVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYTPKSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLPLDEFMEVFDNAINTGYTIAWGSDVSESGFTRDGVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEYYMVKNSWGTNSKYNGIWYASKAFVRYKTMNIVVHKDALPKAIKAKLGIK
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-07-05
Deposition Author(s): Chatterjee, S. , Jiang, Z. , Odonoghue, A.J. , Solania, A. , Wolan, D.W. , Xu, J.H.