5TSX
Hiv-1 ca hexamer with nup153 peptide - p1 crystal form
PDB DOI: 10.2210/pdb5tsx/pdb
Classification: VIRAL PROTEIN Organism(s): Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Ny5) , Synthetic Construct
Deposited: 2016-10-31 Deposition Author(s): Ganser-Pornillos, B.K. , Pornillos, O. , Skorupka, K.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.899 Å
Hiv-1 ca hexamer with nup153 peptide - p1 crystal form
Ganser-Pornillos, B.K. , Pornillos, O. , Skorupka, K.
Primary Citation of Related Structures: 5TSX
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| HIV-1 CA protein | A | 231 | Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Ny5) , Synthetic Construct | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| HIV-1 CA protein | B | 231 | Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Ny5) , Synthetic Construct | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| HIV-1 CA protein | C | 231 | Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Ny5) , Synthetic Construct | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| HIV-1 CA protein | D | 231 | Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Ny5) , Synthetic Construct | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| HIV-1 CA protein | E | 231 | Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Ny5) , Synthetic Construct | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| HIV-1 CA protein | F | 231 | Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Ny5) , Synthetic Construct | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| HIV-1 CA protein | G | 231 | Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Ny5) , Synthetic Construct | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| HIV-1 CA protein | H | 231 | Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Ny5) , Synthetic Construct | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| HIV-1 CA protein | I | 231 | Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Ny5) , Synthetic Construct | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| HIV-1 CA protein | J | 231 | Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Ny5) , Synthetic Construct | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| HIV-1 CA protein | K | 231 | Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Ny5) , Synthetic Construct | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| HIV-1 CA protein | L | 231 | Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Ny5) , Synthetic Construct | PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL |
| Nuclear pore complex protein Nup153 | M | 23 | Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Ny5) , Synthetic Construct | TNNSPSGVFTFGANSSTPAASAQ |
| Nuclear pore complex protein Nup153 | N | 23 | Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Ny5) , Synthetic Construct | TNNSPSGVFTFGANSSTPAASAQ |
| Nuclear pore complex protein Nup153 | O | 23 | Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Ny5) , Synthetic Construct | TNNSPSGVFTFGANSSTPAASAQ |
| Nuclear pore complex protein Nup153 | P | 23 | Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Ny5) , Synthetic Construct | TNNSPSGVFTFGANSSTPAASAQ |
| Nuclear pore complex protein Nup153 | R | 23 | Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Ny5) , Synthetic Construct | TNNSPSGVFTFGANSSTPAASAQ |
| Nuclear pore complex protein Nup153 | T | 23 | Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Ny5) , Synthetic Construct | TNNSPSGVFTFGANSSTPAASAQ |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2016-10-31 Deposition Author(s): Ganser-Pornillos, B.K. , Pornillos, O. , Skorupka, K.