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FASTA Sequence PDB Format mmCIF Format
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5TSJ

Thermus thermophilus v/a-atpase bound to vh dabs

PDB DOI: 10.2210/pdb5tsj/pdb

Classification: membrane protein, hydrolase
Organism(s): Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579)

Deposited: 2016-10-29
Deposition Author(s): Davies, R.B. , Sandin, S. , Smits, C. , Stewart, A.G. , Stock, D. , Wong, A.S.W.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 8.7 Å

5tsj
Literature

Thermus thermophilus v/a-atpase bound to vh dabs

Davies, R.B. , Sandin, S. , Smits, C. , Stewart, A.G. , Stock, D. , Wong, A.S.W.

Primary Citation of Related Structures: 5TSJ


Proteins
Molecule Chains Sequence Length Organism Sequence
V-type ATP synthase alpha chain A 577 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) MIQGVIQKIAGPAVIAKGMLGARMYDICKVGEEGLVGEIIRLDGDTAFVQVYEDTSGLKVGEPVVSTGLPLAVELGPGMLNGIYDGIQRPLERIREKTGIYITRGVVVHALDREKKWAWTPMVKPGDEVRGGMVLGTVPEFGFTHKILVPPDVRGRVKEVKPAGEYTVEEPVVVLEDGTELKMYHTWPVRRARPVQRKLDPNTPFLTGMRILDVLFPVAMGGTAAIPGPFGSGKTVTQQSLAKWSNADVVVYVGCGERGNEMTDVLVEFPELTDPKTGGPLMHRTVLIANTSNMPVAAREASIYVGVTIAEYFRDQGFSVALMADSTSRWAEALREISSRLEEMPAEEGYPPYLAARLAAFYERAGKVITLGGEEGAVTIVGAVSPPGGDMSEPVTQSTLRIVGAFWRLDASLAFRRHFPAINWNGSYSLFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMKKAYGIMKMILAFYKEAEAAIKRGVSIDEILQLPVLERIGRARYVSEEEFPAYFEEAMKEIQGAFKAL
V-type ATP synthase alpha chain B 577 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) MIQGVIQKIAGPAVIAKGMLGARMYDICKVGEEGLVGEIIRLDGDTAFVQVYEDTSGLKVGEPVVSTGLPLAVELGPGMLNGIYDGIQRPLERIREKTGIYITRGVVVHALDREKKWAWTPMVKPGDEVRGGMVLGTVPEFGFTHKILVPPDVRGRVKEVKPAGEYTVEEPVVVLEDGTELKMYHTWPVRRARPVQRKLDPNTPFLTGMRILDVLFPVAMGGTAAIPGPFGSGKTVTQQSLAKWSNADVVVYVGCGERGNEMTDVLVEFPELTDPKTGGPLMHRTVLIANTSNMPVAAREASIYVGVTIAEYFRDQGFSVALMADSTSRWAEALREISSRLEEMPAEEGYPPYLAARLAAFYERAGKVITLGGEEGAVTIVGAVSPPGGDMSEPVTQSTLRIVGAFWRLDASLAFRRHFPAINWNGSYSLFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMKKAYGIMKMILAFYKEAEAAIKRGVSIDEILQLPVLERIGRARYVSEEEFPAYFEEAMKEIQGAFKAL
V-type ATP synthase alpha chain C 577 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) MIQGVIQKIAGPAVIAKGMLGARMYDICKVGEEGLVGEIIRLDGDTAFVQVYEDTSGLKVGEPVVSTGLPLAVELGPGMLNGIYDGIQRPLERIREKTGIYITRGVVVHALDREKKWAWTPMVKPGDEVRGGMVLGTVPEFGFTHKILVPPDVRGRVKEVKPAGEYTVEEPVVVLEDGTELKMYHTWPVRRARPVQRKLDPNTPFLTGMRILDVLFPVAMGGTAAIPGPFGSGKTVTQQSLAKWSNADVVVYVGCGERGNEMTDVLVEFPELTDPKTGGPLMHRTVLIANTSNMPVAAREASIYVGVTIAEYFRDQGFSVALMADSTSRWAEALREISSRLEEMPAEEGYPPYLAARLAAFYERAGKVITLGGEEGAVTIVGAVSPPGGDMSEPVTQSTLRIVGAFWRLDASLAFRRHFPAINWNGSYSLFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMKKAYGIMKMILAFYKEAEAAIKRGVSIDEILQLPVLERIGRARYVSEEEFPAYFEEAMKEIQGAFKAL
Human heavy chain domain antibody 1 149 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) STEVQLLESGGGLVQPGGSLRLSCAASGFTFSTYMMSWVRQAPGKGLEWVSSIEGSGSKTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKRDSSFGFDYWGQGTLVTVSSAAALEIKRASQPELAPEDPEDVEHHHHHH
Human heavy chain domain antibody 2 149 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) STEVQLLESGGGLVQPGGSLRLSCAASGFTFSTYMMSWVRQAPGKGLEWVSSIEGSGSKTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKRDSSFGFDYWGQGTLVTVSSAAALEIKRASQPELAPEDPEDVEHHHHHH
V-type ATP synthase beta chain D 457 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) EYTGITYISGPLLFVENAKDLAYGAIVDIKDGTGRVRGGQVIEVSEEYAVIQVFEETTGLDLATTSVSLVEDVARLGVSKEMLGRRFNGIGKPIDGLPPITPEKRLPITGLPLNPVARRKPEQFIQTGISTIDVMNTLVRGQKLPIFSGSGLPANEIAAQIARQATVRPDLSGEGEKEEPFAVVFAAMGITQRELSYFIQEFERTGALSRSVLFLNKADDPTIERILTPRMALTVAEYLAFEHDYHVLVILTDMTNYCEALREIGAAREEIPGRRGYPGYMYTDLATIYERAGVVEGKKGSVTQIPILSMPDDDRTHPIPDLTGYITEGQIQLSRELHRKGIYPPIDPLPSLSRLMNNGVGKGKTREDHKQVSDQLYSAYANGVDIRKLVAIIGEDALTENDRRYLQFADAFERFFINQGQQNRSIEESLQIAWALLSMLPQGELKRISKDHIGKYY
V-type ATP synthase beta chain E 457 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) EYTGITYISGPLLFVENAKDLAYGAIVDIKDGTGRVRGGQVIEVSEEYAVIQVFEETTGLDLATTSVSLVEDVARLGVSKEMLGRRFNGIGKPIDGLPPITPEKRLPITGLPLNPVARRKPEQFIQTGISTIDVMNTLVRGQKLPIFSGSGLPANEIAAQIARQATVRPDLSGEGEKEEPFAVVFAAMGITQRELSYFIQEFERTGALSRSVLFLNKADDPTIERILTPRMALTVAEYLAFEHDYHVLVILTDMTNYCEALREIGAAREEIPGRRGYPGYMYTDLATIYERAGVVEGKKGSVTQIPILSMPDDDRTHPIPDLTGYITEGQIQLSRELHRKGIYPPIDPLPSLSRLMNNGVGKGKTREDHKQVSDQLYSAYANGVDIRKLVAIIGEDALTENDRRYLQFADAFERFFINQGQQNRSIEESLQIAWALLSMLPQGELKRISKDHIGKYY
V-type ATP synthase beta chain F 457 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) EYTGITYISGPLLFVENAKDLAYGAIVDIKDGTGRVRGGQVIEVSEEYAVIQVFEETTGLDLATTSVSLVEDVARLGVSKEMLGRRFNGIGKPIDGLPPITPEKRLPITGLPLNPVARRKPEQFIQTGISTIDVMNTLVRGQKLPIFSGSGLPANEIAAQIARQATVRPDLSGEGEKEEPFAVVFAAMGITQRELSYFIQEFERTGALSRSVLFLNKADDPTIERILTPRMALTVAEYLAFEHDYHVLVILTDMTNYCEALREIGAAREEIPGRRGYPGYMYTDLATIYERAGVVEGKKGSVTQIPILSMPDDDRTHPIPDLTGYITEGQIQLSRELHRKGIYPPIDPLPSLSRLMNNGVGKGKTREDHKQVSDQLYSAYANGVDIRKLVAIIGEDALTENDRRYLQFADAFERFFINQGQQNRSIEESLQIAWALLSMLPQGELKRISKDHIGKYY
V-type ATP synthase subunit E G 186 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) KLEAILSQEVEAEIQALLQEAEAKAEAVKREAEEKAKALLQARERALEAQYRAALRRAESAGELLVATARTQARGEVLEEVRRRVREALEALPQKPEWPEVVRKLALEALEALPGAKALVANPEDLPHLEAMARERGVELQAEPALRLGVRAVGAEGKTQVENSLLARMDRAWDAMSSKVAQALWG
V-type ATP synthase subunit E H 186 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) KLEAILSQEVEAEIQALLQEAEAKAEAVKREAEEKAKALLQARERALEAQYRAALRRAESAGELLVATARTQARGEVLEEVRRRVREALEALPQKPEWPEVVRKLALEALEALPGAKALVANPEDLPHLEAMARERGVELQAEPALRLGVRAVGAEGKTQVENSLLARMDRAWDAMSSKVAQALWG
V-type ATPase subunit G I 105 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) GMGGLGLIKSLAEKEKQLLERLEAAKKEAEERVKRAEAEAKALLEEAEAKAKALEAQYRERERAETEALLARYRERAEAEAKAVREKAMARLDEAVALVLKEVLP
V-type ATPase subunit G J 105 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) GMGGLGLIKSLAEKEKQLLERLEAAKKEAEERVKRAEAEAKALLEEAEAKAKALEAQYRERERAETEALLARYRERAEAEAKAVREKAMARLDEAVALVLKEVLP
V-type ATP synthase subunit D K 210 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) SQVSPTRMNLLQRRGQLRLAQKGVDLLKKKRDALVAEFFGLVREAMEARKALDQAAKEAYAALLLAQAFDGPEVVAGAALGVPPLEGVEAEVENVWGSKVPRLKATFPDGALLSPVGTPAYTLEASRAFRRYAEALIRVANTETRLKKIGEEIKKTTRRVNALEQVVIPGIRAQIRFIQQVLEQREREDTFRLKRIKGKIEAREAEEEGG
V-type ATP synthase subunit F L 100 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) MAVIADPETAQGFRLAGLEGYGASSAEEAQSLLETLVERGGYALVAVDEALLPDPERAVERLMRGRDLPVLLPIAGLKEAFQGHDVEGYMRELVRKTIGF
V-type ATP synthase subunit C M 323 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) MADDFAYLNARVRVRRGTLLKESFFQEALDLSFADFLRLLSETVYGGELAGQGLPDVDRAVLRTQAKLVGDLPRLVTGEAREAVRLLLLRNDLHNLQALLRAKATGRPFEEVLLLPGTLREEVWRQAYEAQDPAGMAQVLAVPGHPLARALRAVLRETQDLARVEALLAKRFFEDVAKAAKGLDQPALRDYLALEVDAENLRTAFKLQGSGLAPDAFFLKGGRFVDRVRFARLMEGDYAVLDELSGTPFSGLSGVRDLKALERGLRCVLLKEAKKGVQDPLGVGLVLAYVKEREWEAVRLRLLARRAYFGLPRAQVEEEVVCP
Archaeal/vacuolar-type H+-ATPase subunit I N 652 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) MIAPMEKLVLAGPKGRAKELLQSLQQAGVVHLETLRPEALSAYQLSPEERAELRRWEAVSAGAEHTLSLLGLEAEPARPFPEGLEAAEKALSPIQAHAEGLTRQKQELEEELALAQAYLEPLERLAALAHGLDKSPFLRVIPFLLTEKELPLVEEALRKALEDRYLLAHEAYAGGVPALVVVHRKEVDQAKAALSRAGVAELRLPGALGELPLSEAARRLKERAEAAPRELSEVRQHLAKLARESASTLQSLWTRAQDEVARLKALEELASGRFGFALLGYVPVKAKPKVEEALARHKENVVYAFEPVDEHHEADRIPVVLDNPPWVKPFELLVSFLNTPKYGTFDPTPVVPIFFPFWFGMIVGDIGYALLFYLVGRWLSGYVKRNEPLVIDLFALKLKPPVLAKLVYILNWMVFWTVVWGLIYGEFFGTFLEHLGVFGTPEHPGLIPILIHRIDTAKTANLLILLSVAFGVVMVFAGLILRAYLGLKHRHMAHFWEGVGYLGGLLGILALAASYLGNLQAGWLSALMYLGFGVFLLSVVMSSIWLMIPEIFTQAGHILSHIRIYAVGAAGGILAGLLTDVGFAMAERLGLIGVLLGIVVAGVLHLLILLLTTLGHMLQPIRLIWVEFFTKFGFYEENGRPYRPFKSVRETQ
Vacuolar type ATP synthase subunit O 99 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) MKKLLVTVLLAVFGALAFAAEEAAASGGLDRGLIAVGMGLAVGLAALGTGVAQARIGAAGVGAIAEDRSNFGTALIFLLLPETLVIFGLLIAFILNGRL
Vacuolar type ATP synthase subunit P 99 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) MKKLLVTVLLAVFGALAFAAEEAAASGGLDRGLIAVGMGLAVGLAALGTGVAQARIGAAGVGAIAEDRSNFGTALIFLLLPETLVIFGLLIAFILNGRL
Vacuolar type ATP synthase subunit Q 99 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) MKKLLVTVLLAVFGALAFAAEEAAASGGLDRGLIAVGMGLAVGLAALGTGVAQARIGAAGVGAIAEDRSNFGTALIFLLLPETLVIFGLLIAFILNGRL
Vacuolar type ATP synthase subunit R 99 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) MKKLLVTVLLAVFGALAFAAEEAAASGGLDRGLIAVGMGLAVGLAALGTGVAQARIGAAGVGAIAEDRSNFGTALIFLLLPETLVIFGLLIAFILNGRL
Vacuolar type ATP synthase subunit S 99 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) MKKLLVTVLLAVFGALAFAAEEAAASGGLDRGLIAVGMGLAVGLAALGTGVAQARIGAAGVGAIAEDRSNFGTALIFLLLPETLVIFGLLIAFILNGRL
Vacuolar type ATP synthase subunit T 99 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) MKKLLVTVLLAVFGALAFAAEEAAASGGLDRGLIAVGMGLAVGLAALGTGVAQARIGAAGVGAIAEDRSNFGTALIFLLLPETLVIFGLLIAFILNGRL
Vacuolar type ATP synthase subunit U 99 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) MKKLLVTVLLAVFGALAFAAEEAAASGGLDRGLIAVGMGLAVGLAALGTGVAQARIGAAGVGAIAEDRSNFGTALIFLLLPETLVIFGLLIAFILNGRL
Vacuolar type ATP synthase subunit V 99 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) MKKLLVTVLLAVFGALAFAAEEAAASGGLDRGLIAVGMGLAVGLAALGTGVAQARIGAAGVGAIAEDRSNFGTALIFLLLPETLVIFGLLIAFILNGRL
Vacuolar type ATP synthase subunit W 99 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) MKKLLVTVLLAVFGALAFAAEEAAASGGLDRGLIAVGMGLAVGLAALGTGVAQARIGAAGVGAIAEDRSNFGTALIFLLLPETLVIFGLLIAFILNGRL
Vacuolar type ATP synthase subunit X 99 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) MKKLLVTVLLAVFGALAFAAEEAAASGGLDRGLIAVGMGLAVGLAALGTGVAQARIGAAGVGAIAEDRSNFGTALIFLLLPETLVIFGLLIAFILNGRL
Vacuolar type ATP synthase subunit Y 99 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) MKKLLVTVLLAVFGALAFAAEEAAASGGLDRGLIAVGMGLAVGLAALGTGVAQARIGAAGVGAIAEDRSNFGTALIFLLLPETLVIFGLLIAFILNGRL
Vacuolar type ATP synthase subunit Z 99 Homo Sapiens , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) MKKLLVTVLLAVFGALAFAAEEAAASGGLDRGLIAVGMGLAVGLAALGTGVAQARIGAAGVGAIAEDRSNFGTALIFLLLPETLVIFGLLIAFILNGRL
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2016-10-29
Deposition Author(s): Davies, R.B. , Sandin, S. , Smits, C. , Stewart, A.G. , Stock, D. , Wong, A.S.W.